RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SPRYD4Q8WW59 207 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-208ENST00000588692 ERGIC1Q969X5 290 aa12.16□□□□□ -0.46
DDX39A-208ENST00000588692 INTS14Q96SY0 518 aa12.16□□□□□ -0.46
DDX39A-208ENST00000588692 TOR3AQ9H497 397 aa12.16□□□□□ -0.46
DDX39A-208ENST00000588692 MARCH7Q9H992 704 aa12.16□□□□□ -0.46
DDX39A-208ENST00000588692 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
DDX39A-208ENST00000588692 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
DDX39A-208ENST00000588692 A0A0A6YYJ9 748 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 FAM183AA6NL82 134 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 H0YL77 283 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 GLCEO94923 617 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 HMGN1P05114 100 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 OSMP13725 252 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 GSTT1P30711 240 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 RAD23AP54725 363 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 SNAI3Q3KNW1 292 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 RHOUQ7L0Q8 258 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 ZNF771Q7L3S4 317 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-208ENST00000588692 DNAJC9Q8WXX5 260 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 NRBF2Q96F24 287 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 REPIN1Q9BWE0 567 aaKnown RBP12.15□□□□□ -0.46
DDX39A-208ENST00000588692 TEX12Q9BXU0 123 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 TMPRSS13Q9BYE2 586 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 SP140LQ9H930 580 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 CENPMQ9NSP4 180 aa12.15□□□□□ -0.46
DDX39A-208ENST00000588692 POLR3KQ9Y2Y1 108 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-208ENST00000588692 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 A8MXK9 166 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 PRR23D1E9PI22 279 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 F5H0A9 414 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 PRODHO43272 600 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 XRCC2O43543 280 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 GMDSO60547 372 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 APOC1P02654 83 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 HLA-DPB1P04440 258 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 PRR23D2P0DMB1 279 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 POU1F1P28069 291 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 CD200P41217 278 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 RASSF2P50749 326 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 PRKXP51817 358 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 PRSS12P56730 875 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 LCN2P80188 198 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 ZNF92Q03936 586 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 BNIP1Q12981 228 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 EIF2B1Q14232 305 aaKnown RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 GINS1Q14691 196 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 GLYATL3Q5SZD4 288 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 SHFQ7M4L6 423 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 DPY19L4Q7Z388 723 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 C1QL2Q7Z5L3 287 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 MOGAT3Q86VF5 341 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 OR6N2Q8NGY6 317 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 ZNF420Q8TAQ5 688 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 OTULINQ96BN8 352 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 MED20Q9H944 212 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 MRPL15Q9P015 296 aaKnown RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 GGT3PA6NGU5 568 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 GSC2O15499 205 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 IRF2P14316 349 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 HSD11B1P28845 292 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 CDK5Q00535 292 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 HNRNPA0Q13151 305 aaKnown RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 MAB21L1Q13394 359 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 OR8G1Q15617 311 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 ESCO2Q56NI9 601 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 C1orf229Q6ZS94 237 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 KLBQ86Z14 1044 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 HS3ST5Q8IZT8 346 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 OR2AE1Q8NHA4 323 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 Q8TCH9 128 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 SPSB4Q96A44 273 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 PLEKHA8Q96JA3 519 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 ADAT1Q9BUB4 502 aaKnown RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 ABHD6Q9BV23 337 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 C19orf24Q9BVV8 132 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 CADM1Q9BY67 442 aaKnown RBP12.14□□□□□ -0.47
DDX39A-208ENST00000588692 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 C7orf69Q9H7B7 122 aa12.14□□□□□ -0.47
DDX39A-208ENST00000588692 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 ATP5HO75947 161 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
DDX39A-208ENST00000588692 AVPP01185 164 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 EPHA1P21709 976 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 CA6P23280 308 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
DDX39A-208ENST00000588692 DDOSTP39656 456 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 CX3CR1P49238 355 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 SLC35D3Q5M8T2 416 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 TIGD4Q8IY51 512 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 SPERTQ8NA61 448 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 PLPP7Q8NBV4 271 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 OR52H1Q8NGJ2 320 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
DDX39A-208ENST00000588692 NANPQ8TBE9 248 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms