RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 TSPEARQ8WU66 669 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 ADAT1Q9BUB4 502 aaKnown RBP12.54□□□□□ -0.4
IFT20-216ENST00000588477 FNDC11Q9BVV2 318 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 TOR3AQ9H497 397 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 AURKAIP1Q9NWT8 199 aaPredicted RBP12.54□□□□□ -0.4
IFT20-216ENST00000588477 C1orf123Q9NWV4 160 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
IFT20-216ENST00000588477 SNX13Q9Y5W8 968 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 RYR3Q15413 4870 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 IGHV3OR15-7A0A075B7D8 119 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 A0A087WUU8 490 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 RNASEK-C17orf49H0YIS7 233 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 SOCS2O14508 198 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 GMDSO60547 372 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 LCATP04180 440 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 GRPP07492 148 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 EEF1B2P24534 225 aaKnown RBP12.53□□□□□ -0.4
IFT20-216ENST00000588477 SDHAP31040 664 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 SELENOWP63302 87 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 METAP1DQ6UB28 335 aaPredicted RBP12.53□□□□□ -0.4
IFT20-216ENST00000588477 ZNF730Q6ZMV8 503 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 PTCHD4Q6ZW05 846 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
IFT20-216ENST00000588477 OFCC1Q8IZS5 231 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 GCSAMQ8N6F7 178 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 FAM156AQ8NDB6 213 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 OR5R1Q8NH85 324 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 ACOT11Q8WXI4 607 aaPredicted RBP12.53□□□□□ -0.4
IFT20-216ENST00000588477 TSSK2Q96PF2 358 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 SH3GL1Q99961 368 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 SLC22A4Q9H015 551 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 KAAG1Q9UBP8 84 aa12.53□□□□□ -0.4
IFT20-216ENST00000588477 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
IFT20-216ENST00000588477 A0A1B0GW55 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 hCG_1807616A0A1W2PRN6 198 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 NPFFO15130 113 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.41
IFT20-216ENST00000588477 PAHP00439 452 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L2P0CJ85 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 KDELR2P33947 212 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 CDKN2AP42771 156 aaKnown RBP12.52□□□□□ -0.41
IFT20-216ENST00000588477 EFNB2P52799 333 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 KLRD1Q13241 179 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 KRTAP27-1Q3LI81 207 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 ERICH5Q6P6B1 374 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4L9Q6RFH8 374 aaPredicted RBP12.52□□□□□ -0.41
IFT20-216ENST00000588477 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 MBOAT2Q6ZWT7 520 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 LINC00346Q8IVM7 164 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 LYG1Q8N1E2 194 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 PNKDQ8N490 385 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 LY6G5BQ8NDX9 201 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 LZICQ8WZA0 190 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 CFHR4Q92496 578 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 PITX2Q99697 317 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 NDEL1Q9GZM8 345 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 TMBIM4Q9HC24 238 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 NRIP3Q9NQ35 241 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DUX4Q9UBX2 424 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 RAB21Q9UL25 225 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 AURKCQ9UQB9 309 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 IER3IP1Q9Y5U9 82 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
IFT20-216ENST00000588477 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 A6NLC8 198 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 CD300LBA8K4G0 201 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 DCTN6O00399 190 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 FFAR1O14842 300 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 XPNPEP2O43895 674 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 NDUFB2O95178 105 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 LHBP01229 141 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
IFT20-216ENST00000588477 KIR2DS4P43632 304 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 ELF3P78545 371 aaPredicted RBP12.51□□□□□ -0.41
IFT20-216ENST00000588477 TEX36Q5VZQ5 186 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 GPR139Q6DWJ6 353 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 PGM2L1Q6PCE3 622 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 RRM2BQ7LG56 351 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 CMTM4Q8IZR5 234 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 SPERTQ8NA61 448 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 CCL13Q99616 98 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 ATF6BQ99941 703 aa12.51□□□□□ -0.41
IFT20-216ENST00000588477 SRA1Q9HD15 236 aaKnown RBP12.51□□□□□ -0.41
IFT20-216ENST00000588477 GGT3PA6NGU5 568 aa12.5□□□□□ -0.41
IFT20-216ENST00000588477 H3BUX3 64 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms