RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 CD276Q5ZPR3 534 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 PGM2L1Q6PCE3 622 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 Q6ZPA2 131 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 LINC00346Q8IVM7 164 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 OR11L1Q8NGX0 322 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 DYDC1Q8WWB3 177 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 SLCO4A1Q96BD0 722 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 RSRC1Q96IZ7 334 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 ATF6BQ99941 703 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 ADAT1Q9BUB4 502 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 HCAR1Q9BXC0 346 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 TCF7L1Q9HCS4 588 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 INTS9Q9NV88 658 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 ERVK-18Q9QC07 812 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 KAAG1Q9UBP8 84 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 CYB5R1Q9UHQ9 305 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 TMEM5Q9Y2B1 443 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 POLR1DQ9Y2S0 133 aa11.35□□□□□ -0.59
CLPTM1-208ENST00000588274 OOEPA6NGQ2 149 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 LHBP01229 141 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 IRF2P14316 349 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ARF6P62330 175 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ZNF92Q03936 586 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 IFI44LQ53G44 452 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 TEX36Q5VZQ5 186 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 C8orf82Q6P1X6 216 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 DPY19L2P2Q6ZN68 376 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ZNF826PQ6ZT77 177 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 BTN2A1Q7KYR7 527 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ZBTB46Q86UZ6 589 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 PDZD9Q8IXQ8 264 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 SLC15A3Q8IY34 581 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 PLPP7Q8NBV4 271 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 FAM110DQ8TAY7 271 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 LZICQ8WZA0 190 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 DHRS1Q96LJ7 313 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 FN3KRPQ9HA64 309 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 MRPL22Q9NWU5 206 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 B9D1Q9UPM9 204 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 ENPP4Q9Y6X5 453 aa11.34□□□□□ -0.59
CLPTM1-208ENST00000588274 TRBV4-1A0A0J9YWV2 114 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 CD300LBA8K4G0 201 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 F5H5K5 113 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 NME4O00746 187 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 DVL1O14640 695 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 ZNF682O95780 498 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 GYPAP02724 150 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 IFNA8P32881 189 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 DLX1P56177 255 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 OR8G1Q15617 311 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 C2orf68Q2NKX9 166 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 C11orf91Q3C1V1 193 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 CDONQ4KMG0 1287 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 GDPGP1Q6ZNW5 385 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 PGAP1Q75T13 922 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 VMO1Q7Z5L0 202 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 C11orf53Q8IXP5 236 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 OR2AE1Q8NHA4 323 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 TNFRSF14Q92956 283 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 NMNAT3Q96T66 252 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 ADA2Q9NZK5 511 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 NDUFAF4Q9P032 175 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
CLPTM1-208ENST00000588274 ZNF816-ZNF321PA0A0X1KG74 233 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 CXCR6O00574 342 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 ARPC3O15145 178 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 GMDSO60547 372 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 KRT34O76011 436 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 SERPINA1P01009 418 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 AMY2BP19961 511 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 CRABP1P29762 137 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 EGR3Q06889 387 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 FAM86B1Q8N7N1 296 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 Q8N7P7 452 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 RCN3Q96D15 328 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 C7orf34Q96L11 122 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 FN3KQ9H479 309 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 C1orf123Q9NWV4 160 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 KIF17Q9P2E2 1029 aa11.32□□□□□ -0.6
CLPTM1-208ENST00000588274 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 TRAV38-1A0A0B4J264 116 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 OR6C68A6NDL8 312 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 UNC119BA6NIH7 251 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 M0R135 149 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 NDUFA2O43678 99 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 PRB2P02812 416 aaPredicted RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 LCATP04180 440 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms