RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 HFEQ30201 348 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 SPERTQ8NA61 448 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 UBE2FQ969M7 185 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 SPSB4Q96A44 273 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 TIMD4Q96H15 378 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 MROQ9BYG7 248 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 BPESC1Q9GZL8 116 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 ABCB9Q9NP78 766 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 GMPPBQ9Y5P6 360 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 LOC100130705A0A1B0GUX0 176 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 ZSCAN5BA6NJL1 495 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 CLDN25C9JDP6 229 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 HPXP02790 462 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 ANXA2P07355 339 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 CPT2P23786 658 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 NAA10P41227 235 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 MAGEB1P43366 347 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 SRP9P49458 86 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 SNRPGP62308 76 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 TNFAIP6P98066 277 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 EGR3Q06889 387 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 GK2Q14410 553 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 CARTPTQ16568 116 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 KRT77Q7Z794 578 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 PEG10Q86TG7 708 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 EGFL6Q8IUX8 553 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF679Q8IYX0 411 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 THEM6Q8WUY1 208 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 SLC30A2Q9BRI3 323 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 TMEM100Q9NV29 134 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 FAM118AQ9NWS6 357 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 CLN6Q9NWW5 311 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 DNAJC27Q9NZQ0 273 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 MRPL15Q9P015 296 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 AASSQ9UDR5 926 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 PCDHGB1Q9Y5G3 927 aa11.75□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF670-ZNF695F2Z2N8 137 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 SPRY3O43610 288 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 CD5LO43866 347 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 RP2O75695 350 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 NCR1O76036 304 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ATP6V1G2O95670 118 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 CLIC3O95833 236 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 SBK2P0C263 348 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ATP6V1B1P15313 513 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 PRKXP51817 358 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 RIDAP52758 137 aaKnown RBP11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ACTC1P68032 377 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ACTA1P68133 377 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 CCL8P80075 99 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 OCLNQ16625 522 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 TIGD6Q17RP2 521 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF181Q2M3W8 571 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 TMEM249Q2WGJ8 235 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ALKBH6Q3KRA9 238 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 USP51Q70EK9 711 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ENTHD1Q8IYW4 607 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 CIARTQ8N365 385 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 PLPP7Q8NBV4 271 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF555Q8NEP9 628 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 CSNK2A3Q8NEV1 391 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 SPRYD4Q8WW59 207 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 RAB1CQ92928 201 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 MRPL48Q96GC5 212 aaKnown RBP11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 Q96MT0 163 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 OR8B4Q96RC9 309 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 VCXQ9H320 206 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 POFUT1Q9H488 388 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF275Q9NSD4 429 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 TMEM160Q9NX00 188 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 TANC2Q9HCD6 1990 aa11.74□□□□□ -0.53
PRKCSH-202ENST00000585540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 GGT3PA6NGU5 568 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 CD300LBA8K4G0 201 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 SLC16A6O15403 523 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 GMDSO60547 372 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 LY6HO94772 140 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 FSTL3O95633 263 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 OR2T7P0C7T2 308 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 CR1P17927 2039 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 PCMT1P22061 227 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 ZNF121P58317 390 aaPredicted RBP11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 RIPK1Q13546 671 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 TSTQ16762 297 aaKnown RBP11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 SNAI3Q3KNW1 292 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 TMEM255AQ5JRV8 349 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 SPATC1Q76KD6 591 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 PRSS45Q7RTY3 260 aa11.73□□□□□ -0.53
PRKCSH-202ENST00000585540 SLC35F2Q8IXU6 374 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms