RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 IGHV1-69P01742 117 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 LCATP04180 440 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 TROVE2P10155 538 aaKnown RBP eCLIP11.97□□□□□ -0.49
SDF2-202ENST00000585428 CA6P23280 308 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 GGT2P36268 569 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 SF3A3Q12874 501 aaKnown RBP eCLIP11.97□□□□□ -0.49
SDF2-202ENST00000585428 TRAP1Q12931 704 aaKnown RBP11.97□□□□□ -0.49
SDF2-202ENST00000585428 MALLQ13021 153 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 PDCD1Q15116 288 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 KCNJ8Q15842 424 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 RFX4Q33E94 735 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 C11orf91Q3C1V1 193 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 DNM1P34Q6PK57 102 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 BRICD5Q6PL45 260 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 PGAP1Q75T13 922 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 HDXQ7Z353 690 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.97□□□□□ -0.49
SDF2-202ENST00000585428 PNLDC1Q8NA58 520 aaKnown RBP11.97□□□□□ -0.49
SDF2-202ENST00000585428 GATAD2BQ8WXI9 593 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 ERMAPQ96PL5 475 aaPredicted RBP11.97□□□□□ -0.49
SDF2-202ENST00000585428 NMNAT3Q96T66 252 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 PITX2Q99697 317 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 ATF6BQ99941 703 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 TRIM15Q9C019 465 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 SLC22A4Q9H015 551 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 RASSF4Q9H2L5 321 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 VIPAS39Q9H9C1 493 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 FN3KRPQ9HA64 309 aa11.97□□□□□ -0.49
SDF2-202ENST00000585428 CD300LBA8K4G0 201 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 LHBP01229 141 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 HIST1H1CP16403 213 aaKnown RBP11.96□□□□□ -0.49
SDF2-202ENST00000585428 GSK3BP49841 420 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 PROK1P58294 105 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 OR8G1Q15617 311 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 TAF9Q16594 264 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 SLC36A3Q495N2 470 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 LINC00346Q8IVM7 164 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 ZSCAN4Q8NAM6 433 aaPredicted RBP11.96□□□□□ -0.49
SDF2-202ENST00000585428 SPRYD4Q8WW59 207 aaPredicted RBP11.96□□□□□ -0.49
SDF2-202ENST00000585428 DHRS1Q96LJ7 313 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 TECTBQ96PL2 329 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 SMURF1Q9HCE7 757 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 FGFR1OP2Q9NVK5 253 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 KIF17Q9P2E2 1029 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 AURKCQ9UQB9 309 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 FAM32AQ9Y421 112 aaKnown RBP11.96□□□□□ -0.49
SDF2-202ENST00000585428 CAPN7Q9Y6W3 813 aa11.96□□□□□ -0.49
SDF2-202ENST00000585428 TRAV38-1A0A0B4J264 116 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 OR6C68A6NDL8 312 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 ADAM20O43506 726 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 GPR137BO60478 399 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 IGHV4-59P01825 116 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 NCK1P16333 377 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 SLC7A2P52569 658 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 TPTEP56180 551 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 ARF6P62330 175 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 ZNF92Q03936 586 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 METTL11BQ5VVY1 283 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 LDLRAD3Q86YD5 345 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 OR2AJ1Q8NGZ0 328 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 LHX4Q969G2 390 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 MAP6Q96JE9 813 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 MMADHCQ9H3L0 296 aaPredicted RBP11.95□□□□□ -0.5
SDF2-202ENST00000585428 CNTD2Q9H8S5 307 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 TRIM36Q9NQ86 728 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 MRPL22Q9NWU5 206 aaKnown RBP11.95□□□□□ -0.5
SDF2-202ENST00000585428 KAAG1Q9UBP8 84 aa11.95□□□□□ -0.5
SDF2-202ENST00000585428 NOP16Q9Y3C1 178 aaKnown RBP11.95□□□□□ -0.5
SDF2-202ENST00000585428 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 OOEPA6NGQ2 149 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 IDH3BO43837 385 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 RENP00797 406 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 COX4I1P13073 169 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 ANOS1P23352 680 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 OTX1P32242 354 aaPredicted RBP11.94□□□□□ -0.5
SDF2-202ENST00000585428 OR8B8Q15620 311 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 SNAI3Q3KNW1 292 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 FGD3Q5JSP0 725 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 BTN2A1Q7KYR7 527 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 MRPL21Q7Z2W9 205 aaKnown RBP11.94□□□□□ -0.5
SDF2-202ENST00000585428 GCSAMQ8N6F7 178 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 OR4K13Q8NH42 304 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 OR52J3Q8NH60 311 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 FAM162AQ96A26 154 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 DDOQ99489 341 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 OR52D1Q9H346 318 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 C16orf95Q9H693 158 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 EFCAB1Q9HAE3 211 aa11.94□□□□□ -0.5
SDF2-202ENST00000585428 RPRD1BQ9NQG5 326 aaKnown RBP11.94□□□□□ -0.5
SDF2-202ENST00000585428 DCAF13Q9NV06 445 aaKnown RBP11.94□□□□□ -0.5
SDF2-202ENST00000585428 MRPL15Q9P015 296 aaKnown RBP11.94□□□□□ -0.5
SDF2-202ENST00000585428 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 M0R135 149 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 DVL1O14640 695 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 DIRAS1O95057 198 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 ECDO95905 644 aaPredicted RBP11.93□□□□□ -0.5
SDF2-202ENST00000585428 GYPAP02724 150 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 TEX36Q5VZQ5 186 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms