RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TPTEP56180 551 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 ZNF121P58317 390 aaPredicted RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 IFITM3Q01628 133 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 IL18Q14116 193 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 ZNF79Q15937 498 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 ODF4Q2M2E3 257 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 UBE2NLQ5JXB2 153 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 STEAP3Q658P3 488 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 PYHIN1Q6K0P9 492 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 DRAM2Q6UX65 266 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 ZNF813Q6ZN06 617 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 PGAP1Q75T13 922 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 FGD2Q7Z6J4 655 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 ZNF100Q8IYN0 542 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 SLC22A24Q8N4F4 322 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 NKAIN3Q8N8D7 197 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 POC5Q8NA72 575 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OR52H1Q8NGJ2 320 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OR5D14Q8NGL3 314 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OR10AC1Q8NH08 325 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 PPP1R14AQ96A00 147 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 GMPPAQ96IJ6 420 aaPredicted RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 SDHCQ99643 169 aaPredicted RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 ABCG5Q9H222 651 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 CALHM2Q9HA72 323 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 SLC17A5Q9NRA2 495 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 PLSCR2Q9NRY7 297 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 PLEK2Q9NYT0 353 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 SPRR3Q9UBC9 169 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 EXTL2Q9UBQ6 330 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 STEAP1Q9UHE8 339 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 ZNF391Q9UJN7 358 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 LIPGQ9Y5X9 500 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 APCP25054 2843 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OR6C6A6NF89 314 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 P2RY10O00398 339 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 SLC17A2O00624 439 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 MTRF1O75570 445 aaKnown RBP9.1□□□□□ -0.95
LIG3-203ENST00000585370 ALX3O95076 343 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 MAS1P04201 325 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 COX5BP10606 129 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 SLC2A2P11168 524 aaPredicted RBP9.1□□□□□ -0.95
LIG3-203ENST00000585370 DDOSTP39656 456 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 PRKXP51817 358 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 ART1P52961 327 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 GALK2Q01415 458 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 SLC36A2Q495M3 483 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 TSPO2Q5TGU0 170 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 Q6ZSR3 168 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 SLC16A14Q7RTX9 510 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 P4HA3Q7Z4N8 544 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 ADGRE4PQ86SQ3 457 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 LRRC18Q8N456 261 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 C19orf18Q8NEA5 215 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 OR51A4Q8NGJ6 313 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 OR1F12Q8NHA8 337 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 FBXO17Q96EF6 278 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 S100A16Q96FQ6 103 aaKnown RBP9.1□□□□□ -0.95
LIG3-203ENST00000585370 PGAM5Q96HS1 289 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 OR10A2Q9H208 303 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 SLC7A10Q9NS82 523 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 MED12Q93074 2177 aa9.1□□□□□ -0.95
LIG3-203ENST00000585370 TRAV8-7A0A075B6U6 113 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 A0A1B0GTI1 187 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 LOC390937A0A1W2PQ73 354 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 DHRS7CA6NNS2 312 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 M0R135 149 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 CTDSPLO15194 276 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 SYNGR3O43761 229 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 UBL3O95164 117 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 CNOT4O95628 575 aaKnown RBP9.09□□□□□ -0.95
LIG3-203ENST00000585370 PAHP00439 452 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 HLA-DQB1P01920 261 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 ALDOBP05062 364 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 IL7P13232 177 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 SNRPBP14678 240 aaKnown RBP9.09□□□□□ -0.95
LIG3-203ENST00000585370 ZNF20P17024 532 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 ADRA2CP18825 462 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 ARR3P36575 388 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 GNALP38405 381 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 MNDAP41218 407 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 MAGEB1P43366 347 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 MRPS10P82664 201 aaKnown RBP9.09□□□□□ -0.95
LIG3-203ENST00000585370 ASAH1Q13510 395 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 RAB11BQ15907 218 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 KRTAP27-1Q3LI81 207 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 KRTCAP3Q53RY4 240 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 C1orf100Q5SVJ3 147 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 HES5Q5TA89 166 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 TRIQKQ629K1 86 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 OR2A2Q6IF42 318 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 FAM57BQ71RH2 274 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 PRSS45Q7RTY3 260 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 CCDC36Q8IYA8 594 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 Q8N402 240 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 PLPP7Q8NBV4 271 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 ST6GALNAC3Q8NDV1 305 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 OR8B12Q8NGG6 310 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 OR6M1Q8NGM8 313 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 WNT2BQ93097 391 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms