RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 PYURFQ96I23 114 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 NMNAT3Q96T66 252 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 C1orf21Q9H246 121 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 MUC13Q9H3R2 512 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 FN3KRPQ9HA64 309 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 BEX1Q9HBH7 125 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 KIF17Q9P2E2 1029 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 RNF7Q9UBF6 113 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
VAPA-209ENST00000585042 TRRAPQ9Y4A5 3859 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 P2RY10O00398 339 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
VAPA-209ENST00000585042 LCATP04180 440 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 HLA-DPB1P04440 258 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 CRYBA1P05813 215 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 HIST1H1CP16403 213 aaKnown RBP12.49□□□□□ -0.41
VAPA-209ENST00000585042 NOS3P29474 1203 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 GGT2P36268 569 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 IFNGR2P38484 337 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 PRSS12P56730 875 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 FGF12P61328 243 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 TRAP1Q12931 704 aaKnown RBP12.49□□□□□ -0.41
VAPA-209ENST00000585042 DEFB112Q30KQ8 113 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 SPATC1Q76KD6 591 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 OR4F5Q8NH21 305 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 SPRYD4Q8WW59 207 aaPredicted RBP12.49□□□□□ -0.41
VAPA-209ENST00000585042 SPTSSAQ969W0 71 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 SLCO4A1Q96BD0 722 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 OR52D1Q9H346 318 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 WDR76Q9H967 626 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 ERVK-18Q9QC07 812 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 POMT1Q9Y6A1 747 aa12.49□□□□□ -0.41
VAPA-209ENST00000585042 IGHV3OR16-10A0A075B7F0 116 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 ZNF879B4DU55 563 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 TNFRSF13BO14836 293 aaPredicted RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 ARPC2O15144 300 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 FAM20BO75063 409 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 NDUFA7O95182 113 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 GADD45GO95257 159 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 MSX2P35548 267 aaPredicted RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 MZT1Q08AG7 82 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 OR8G1Q15617 311 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 DNAL1Q4LDG9 190 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 FAM201AQ5SY85 155 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 MRPL21Q7Z2W9 205 aaKnown RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 PNLDC1Q8NA58 520 aaKnown RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 OR4K13Q8NH42 304 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 OR52J3Q8NH60 311 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 FANK1Q8TC84 345 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 RPRD1BQ9NQG5 326 aaKnown RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 ACTR3BQ9P1U1 418 aa12.48□□□□□ -0.41
VAPA-209ENST00000585042 SOX21Q9Y651 276 aaPredicted RBP12.48□□□□□ -0.41
VAPA-209ENST00000585042 TRAV38-1A0A0B4J264 116 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 LGALS8O00214 317 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 GYG2O15488 501 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 KNG1P01042 644 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 HLA-DQA2P01906 255 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 T-ENOLP0DO92 83 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 ZNF823P16415 610 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
VAPA-209ENST00000585042 GSSP48637 474 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 PDCD1Q15116 288 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 MPPED2Q15777 294 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 NAA40Q86UY6 237 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 LINC00346Q8IVM7 164 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 OPA3Q9H6K4 179 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 MRPL15Q9P015 296 aaKnown RBP12.47□□□□□ -0.41
VAPA-209ENST00000585042 TMCC3Q9ULS5 477 aa12.47□□□□□ -0.41
VAPA-209ENST00000585042 OR6C68A6NDL8 312 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 M0R135 149 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 TOX4O94842 621 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 DIRAS1O95057 198 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 ECDO95905 644 aaPredicted RBP12.46□□□□□ -0.41
VAPA-209ENST00000585042 SEMG1P04279 462 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 FABP3P05413 133 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 MMP9P14780 707 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 CA6P23280 308 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 CFHR2P36980 270 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 RASSF2P50749 326 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 TSPAN31Q12999 210 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 TRIM25Q14258 630 aaKnown RBP12.46□□□□□ -0.41
VAPA-209ENST00000585042 RPL13AP3Q6NVV1 102 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 DRAM2Q6UX65 266 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 C17orf107Q6ZR85 190 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 OR4C15Q8NGM1 316 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms