RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ENSAO43768 121 aaKnown RBP14.93□□□□□ -0.02
TOP3A-220ENST00000585031 FUT1P19526 365 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 SELENOWP63302 87 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 CD47Q08722 323 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 DBPQ10586 325 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-220ENST00000585031 IFI44LQ53G44 452 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 OR2T2Q6IF00 324 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 ZDHHC13Q8IUH4 622 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 CBR4Q8N4T8 237 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 NPEPL1Q8NDH3 523 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 OR5K1Q8NHB7 308 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 VANGL1Q8TAA9 524 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-220ENST00000585031 LHX4Q969G2 390 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 ITPKCQ96DU7 683 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 WDFY2Q96P53 400 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 NR1H4Q96RI1 486 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-220ENST00000585031 SIRPDQ9H106 197 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 EMC7Q9NPA0 242 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 NECAP2Q9NVZ3 263 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 SLC13A4Q9UKG4 626 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 SIGLEC9Q9Y336 463 aa14.93□□□□□ -0.02
TOP3A-220ENST00000585031 DYNC2H1Q8NCM8 4307 aaKnown RBP14.93□□□□□ -0.02
TOP3A-220ENST00000585031 BIRC6Q9NR09 4857 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 TRAPPC13A5PLN9 417 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 IFNL4K9M1U5 179 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 GPR37O15354 613 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 E2F6O75461 281 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 SERPINB7O75635 380 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 FSTL3O95633 263 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 SEMG1P04279 462 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 FUT4P22083 530 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 DAP3P51398 398 aaKnown RBP14.92□□□□□ -0.02
TOP3A-220ENST00000585031 OTPQ5XKR4 325 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 NLRC3Q7RTR2 1065 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 NKAIN4Q8IVV8 208 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 C11orf44Q8N8P7 122 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 PTP4A1Q93096 173 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 OSBPL10Q9BXB5 764 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 SMURF1Q9HCE7 757 aa14.92□□□□□ -0.02
TOP3A-220ENST00000585031 M0QX08 132 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 SOCS2O14508 198 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 DENRO43583 198 aaKnown RBP14.91□□□□□ -0.02
TOP3A-220ENST00000585031 OR7A10O76100 309 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 COX10Q12887 443 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 ZNF181Q2M3W8 571 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 SLC35E4Q6ICL7 350 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 OR2T5Q6IEZ7 315 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 C1orf94Q6P1W5 598 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 GDPGP1Q6ZNW5 385 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 DCDC5Q6ZRR9 648 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 VTCN1Q7Z7D3 282 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 OR2T29Q8NH02 315 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 TAMM41Q96BW9 452 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 TOR3AQ9H497 397 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 TMCC3Q9ULS5 477 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 FOXJ3Q9UPW0 622 aa14.91□□□□□ -0.02
TOP3A-220ENST00000585031 A0A1W2PPL8 197 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 G3V2T6 193 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 EI24O14681 340 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 RAC2P15153 192 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 CD247P20963 164 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 PCBD1P61457 104 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 TOP3AQ13472 1001 aaPredicted RBP14.9□□□□□ -0.02
TOP3A-220ENST00000585031 ARL9Q6T311 187 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 VASH1Q7L8A9 365 aaPredicted RBP14.9□□□□□ -0.02
TOP3A-220ENST00000585031 OR8G5Q8NG78 346 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 MPP4Q96JB8 637 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 SLC29A1Q99808 456 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 TXNIPQ9H3M7 391 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 EVA1AQ9H8M9 152 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 REEP1Q9H902 201 aa14.9□□□□□ -0.02
TOP3A-220ENST00000585031 NDRG4Q9ULP0 352 aaKnown RBP14.9□□□□□ -0.02
TOP3A-220ENST00000585031 HLA-DPB1P04440 258 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 DBHP09172 617 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 COX5BP10606 129 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 TUBG1P23258 451 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 HTR5AP47898 357 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 ALDH3A2P51648 485 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 PRSS12P56730 875 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 ARF6P62330 175 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 PRB3Q04118 309 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-220ENST00000585031 MAB21L1Q13394 359 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 GK3PQ14409 553 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 CLEC12AQ5QGZ9 265 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 DHRS7BQ6IAN0 325 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-220ENST00000585031 OR13G1Q8NGZ3 307 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 TMEM255BQ8WV15 326 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 NRBF2Q96F24 287 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 RDH12Q96NR8 316 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 TECTBQ96PL2 329 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 POLE4Q9NR33 117 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 TUBG2Q9NRH3 451 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 SMPD3Q9NY59 655 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-220ENST00000585031 PTTG3PQ9NZH4 202 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 FAM32AQ9Y421 112 aaKnown RBP14.89□□□□□ -0.03
TOP3A-220ENST00000585031 ORC6Q9Y5N6 252 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 SACSQ9NZJ4 4579 aa14.89□□□□□ -0.03
TOP3A-220ENST00000585031 RYR2Q92736 4967 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 MAGEA13PA6NCF6 341 aa14.88□□□□□ -0.03
TOP3A-220ENST00000585031 DOK2O60496 412 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms