RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 IFNEQ86WN2 208 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 GRAMD2AQ8IUY3 354 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CPNE9Q8IYJ1 553 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 GVQW1Q8N7I0 195 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ACBD4Q8NC06 268 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ADAD2Q8NCV1 583 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR8J2Q8NGG1 315 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR51G2Q8NGK0 314 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CLHC1Q8NHS4 586 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZPLD1Q8TCW7 415 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SKA2Q8WVK7 121 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LZICQ8WZA0 190 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SGK3Q96BR1 496 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF597Q96LX8 424 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2A5Q96R48 311 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CHRDL1Q9BU40 450 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CLEC7AQ9BXN2 247 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 DEFB126Q9BYW3 111 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 EGLN1Q9GZT9 426 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 REEP4Q9H6H4 257 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SUDS3Q9H7L9 328 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MED20Q9H944 212 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MCCC2Q9HCC0 563 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ADA2Q9NZK5 511 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM181Q9P2C4 612 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CD300AQ9UGN4 299 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 C15orf41Q9Y2V0 281 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PLLPQ9Y342 182 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 IGKV3D-11A0A0A0MRZ8 115 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRBV7-9A0A0J9YWB2 115 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 LOC102725191A0A1B0GVB3 256 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MFSD2BA6NFX1 497 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM25EA8MYX2 175 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 NDUFS8O00217 210 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TFECO14948 347 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2T1O43869 369 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TIMM8AO60220 97 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SOX15O60248 233 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CDC40O60508 579 aaKnown RBP eCLIP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PLIN3O60664 434 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SNNO75324 88 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CBR3O75828 277 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHG3P01860 377 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CCDC166P0CW27 439 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PTNP21246 168 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OPRM1P35372 400 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RBM34P42696 430 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SSR2P43308 183 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR3A2P47893 321 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PGFP49763 221 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ETV1P50549 477 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RPL14P50914 215 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SEC61GP60059 68 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CRADDP78560 199 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RPL24P83731 157 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FUT7Q11130 342 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 BNIP2Q12982 314 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 STX3Q13277 289 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ATXN7L3Q14CW9 347 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PLCXD3Q63HM9 321 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CLEC6AQ6EIG7 209 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC25A25Q6KCM7 469 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 METAP1DQ6UB28 335 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SBSNQ6UWP8 590 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 Q6ZN92 141 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF547Q8IVP9 402 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MARVELD2Q8N4S9 558 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MAPKAPK5-AS1Q8N8E1 139 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CHDHQ8NE62 594 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM83FQ8NEG4 500 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR8J3Q8NGG0 315 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR10G8Q8NGN5 311 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR13C4Q8NGS5 318 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2T6Q8NHC8 308 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MAGEE2Q8TD90 523 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CA5BP1Q8WTZ4 195 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM222BQ8WU58 562 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CT55Q8WUE5 264 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RNF138Q8WVD3 245 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SORCS1Q8WY21 1168 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 C2orf48Q96LS8 159 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SFXN3Q9BWM7 321 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 POTEKPQ9BYX7 375 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRIM4Q9C037 500 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MAGT1Q9H0U3 335 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 BCL2L10Q9HD36 194 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MIEF1Q9NQG6 463 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MDFICQ9P1T7 246 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PACSIN2Q9UNF0 486 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ANGPT4Q9Y264 503 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SNX24Q9Y343 169 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 HDGFL3Q9Y3E1 203 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ARL5AQ9Y689 179 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MYO9BQ13459 2157 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRAV26-1A0A087WT03 109 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV1-45A0A0A0MS14 117 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 NPIPA7E9PJI5 369 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MANBAO00462 879 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IMPA2O14732 288 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 HDAC3O15379 428 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms