RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	OR51L1	Q8NGJ5	315 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR6K6	Q8NGW6	343 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNRF4	Q8WWF5	429 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ITFG2	Q969R8	447 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	FAHD2A	Q96GK7	314 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SIGLEC11	Q96RL6	698 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	INTS14	Q96SY0	518 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	COPS4	Q9BT78	406 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PATZ1	Q9HBE1	687 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	LPAR2	Q9HBW0	351 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MRPL15	Q9P015	296 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CD300LB	A8K4G0	201 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708		A8MXK9	166 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PRR23D1	E9PI22	279 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MLNR	O43193	412 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	XRCC2	O43543	280 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PTBP3	O95758	552 aa	Known RBP	10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GYPB	P06028	91 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SBK2	P0C263	348 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GSTT1	P30711	240 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	RAD23A	P54725	363 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GINS1	Q14691	196 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SNCB	Q16143	134 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SPRN	Q5BIV9	151 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	DCAF12L2	Q5VW00	463 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	NAA40	Q86UY6	237 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PARP8	Q8N3A8	854 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR10AD1	Q8NGE0	317 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR52H1	Q8NGJ2	320 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708		Q8TCH9	128 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZFAND2B	Q8WV99	257 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	RNF133	Q8WVZ7	376 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SPSB4	Q96A44	273 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SLCO4A1	Q96BD0	722 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	LRCH1	Q9Y2L9	728 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	WNK2	Q9Y3S1	2297 aa		10.6	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708		F5H0A9	414 aa	Predicted RBP	10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	IRF2	P14316	349 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF92	Q03936	586 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZMYND11	Q15326	602 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	USP43	Q70EL4	1123 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	C1QL2	Q7Z5L3	287 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TMEM179B	Q7Z7N9	219 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TIGD4	Q8IY51	512 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	BHLHE23	Q8NDY6	225 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR11L1	Q8NGX0	322 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	NANP	Q8TBE9	248 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PLEKHA8	Q96JA3	519 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CADM1	Q9BY67	442 aa	Known RBP	10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TMPRSS13	Q9BYE2	586 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PRRG3	Q9BZD7	231 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	RGCC	Q9H4X1	137 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	METTL17	Q9H7H0	456 aa	Predicted RBP	10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	NIPAL2	Q9H841	368 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SLC25A19	Q9HC21	320 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TRIM36	Q9NQ86	728 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CENPM	Q9NSP4	180 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	UBAP1	Q9NZ09	502 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MIOX	Q9UGB7	285 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF391	Q9UJN7	358 aa		10.59	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SVEP1	Q4LDE5	3571 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	GGT3P	A6NGU5	568 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708		F5H5P2	479 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	CLU	P10909	449 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	POU1F1	P28069	291 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	HSD11B1	P28845	292 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	RPS27	P42677	84 aa	Known RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	PRKX	P51817	358 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	DBP	Q10586	325 aa	Predicted RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	EIF2B1	Q14232	305 aa	Known RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	OR8G1	Q15617	311 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	KCNJ8	Q15842	424 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	SNAI3	Q3KNW1	292 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	ESCO2	Q56NI9	601 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	GLYATL3	Q5SZD4	288 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	FAHD1	Q6P587	224 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	LYPD4	Q6UWN0	246 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	DPY19L4	Q7Z388	723 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	ERI1	Q8IV48	349 aa	Known RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	PHC2	Q8IXK0	858 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	IQCF1	Q8N6M8	205 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	OR6N2	Q8NGY6	317 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	ZNF418	Q8TF45	676 aa	Predicted RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	UTP4	Q969X6	686 aa	Known RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	DUS3L	Q96G46	650 aa	Known RBP	10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	JMJD8	Q96S16	334 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	ABHD6	Q9BV23	337 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	FN3KRP	Q9HA64	309 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	ENOPH1	Q9UHY7	261 aa		10.58	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	FBN3	Q75N90	2809 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	FAM183A	A6NL82	134 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708		H0YL77	283 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	LYN	P07948	512 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	WNT2	P09544	360 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	PPIAL4G	P0DN37	164 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	PSKH1	P11801	424 aa		10.57	□□□□□ -0.72
CDK5RAP3-222	ENST00000581708	FCGR1A	P12314	374 aa		10.57	□□□□□ -0.72

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