RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 ALOX5APP20292 161 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 GZMKP49863 264 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 GRB2P62993 217 aaKnown RBP17.01■□□□□ 0.31
SS18-218ENST00000581021 MVKQ03426 396 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 PGAP1Q75T13 922 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 SLC16A9Q7RTY1 509 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 ZNF283Q8N7M2 679 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 ZNF454Q8N9F8 522 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 CCL17Q92583 94 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 C1orf159Q96HA4 380 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 ZNF582Q96NG8 517 aaPredicted RBP17.01■□□□□ 0.31
SS18-218ENST00000581021 OR2V2Q96R30 315 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 REPIN1Q9BWE0 567 aaKnown RBP17.01■□□□□ 0.31
SS18-218ENST00000581021 EGLN1Q9GZT9 426 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 USE1Q9NZ43 259 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 COPS3Q9UNS2 423 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 WIPI2Q9Y4P8 454 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 IGHV3-64DA0A0J9YX35 117 aa17■□□□□ 0.31
SS18-218ENST00000581021 CD300LBA8K4G0 201 aa17■□□□□ 0.31
SS18-218ENST00000581021 A8MV72 311 aaPredicted RBP17■□□□□ 0.31
SS18-218ENST00000581021 E9PQ18 207 aa17■□□□□ 0.31
SS18-218ENST00000581021 SELEP16581 610 aa17■□□□□ 0.31
SS18-218ENST00000581021 SLC15A1P46059 708 aa17■□□□□ 0.31
SS18-218ENST00000581021 ZNF121P58317 390 aaPredicted RBP17■□□□□ 0.31
SS18-218ENST00000581021 LMO4P61968 165 aa17■□□□□ 0.31
SS18-218ENST00000581021 MALLQ13021 153 aa17■□□□□ 0.31
SS18-218ENST00000581021 HFEQ30201 348 aa17■□□□□ 0.31
SS18-218ENST00000581021 LRRN1Q6UXK5 716 aa17■□□□□ 0.31
SS18-218ENST00000581021 MRPL21Q7Z2W9 205 aaKnown RBP17■□□□□ 0.31
SS18-218ENST00000581021 CBR4Q8N4T8 237 aa17■□□□□ 0.31
SS18-218ENST00000581021 THEM6Q8WUY1 208 aa17■□□□□ 0.31
SS18-218ENST00000581021 HPS1Q92902 700 aa17■□□□□ 0.31
SS18-218ENST00000581021 RAB3IPQ96QF0 476 aaPredicted RBP17■□□□□ 0.31
SS18-218ENST00000581021 FAM157AC9JC47 383 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 CLDN25C9JDP6 229 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 F5H5P2 479 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 CRLF1O75462 422 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 NXNL2Q5VZ03 156 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 FAM57BQ71RH2 274 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 RHOUQ7L0Q8 258 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 MEPCEQ7L2J0 689 aaKnown RBP16.99■□□□□ 0.31
SS18-218ENST00000581021 OR13G1Q8NGZ3 307 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 SPSB4Q96A44 273 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 MEGF10Q96KG7 1140 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 SIGLEC11Q96RL6 698 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 TTTY10Q9BZA0 68 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 PRRG3Q9BZD7 231 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 YIPF3Q9GZM5 350 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 TOR3AQ9H497 397 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 ADGRL4Q9HBW9 690 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 IL19Q9UHD0 177 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 ENOPH1Q9UHY7 261 aa16.99■□□□□ 0.31
SS18-218ENST00000581021 CUBNO60494 3623 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 LOC100289279A0A1B0GTE1 492 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 PSMD9O00233 223 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 ANXA2P07355 339 aaKnown RBP16.98■□□□□ 0.31
SS18-218ENST00000581021 H2BFMP0C1H6 154 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 HSD11B1P28845 292 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 MMP16P51512 607 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 CDH15P55291 814 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 LCN1P1Q5VSP4 162 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 PQLC1Q8N2U9 271 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 OR56B2PQ8NGI1 322 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 DVL3Q92997 716 aaPredicted RBP16.98■□□□□ 0.31
SS18-218ENST00000581021 UBE2FQ969M7 185 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 SGK3Q96BR1 496 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 MBOAT4Q96T53 435 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 CNN2Q99439 309 aaKnown RBP16.98■□□□□ 0.31
SS18-218ENST00000581021 SLC29A1Q99808 456 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 GCM1Q9NP62 436 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 BRD7Q9NPI1 651 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 TMEM106BQ9NUM4 274 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 LRP12Q9Y561 859 aa16.98■□□□□ 0.31
SS18-218ENST00000581021 TBX1O43435 398 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 TNFSF4P23510 183 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 PMELP40967 661 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 ALDH3A2P51648 485 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 PSMA6P60900 246 aaKnown RBP16.97■□□□□ 0.31
SS18-218ENST00000581021 MAB21L1Q13394 359 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 ZIK1Q3SY52 487 aaPredicted RBP16.97■□□□□ 0.31
SS18-218ENST00000581021 ZNF771Q7L3S4 317 aaPredicted RBP16.97■□□□□ 0.31
SS18-218ENST00000581021 SPRYD4Q8WW59 207 aaPredicted RBP16.97■□□□□ 0.31
SS18-218ENST00000581021 TMEM100Q9NV29 134 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 LAMP5Q9UJQ1 280 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 DYSFO75923 2080 aa16.97■□□□□ 0.31
SS18-218ENST00000581021 hCG_38984A0A1B0GV85 526 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 TGFAP01135 160 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 CA6P23280 308 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 FAM3AP98173 230 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 PRIMA1Q86XR5 153 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 ZNF420Q8TAQ5 688 aaPredicted RBP16.96■□□□□ 0.31
SS18-218ENST00000581021 REEP6Q96HR9 211 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 PPP1R3EQ9H7J1 279 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 PPP1R3CQ9UQK1 317 aa16.96■□□□□ 0.31
SS18-218ENST00000581021 GGT3PA6NGU5 568 aa16.95■□□□□ 0.3
SS18-218ENST00000581021 SLC22A31A6NKX4 558 aa16.95■□□□□ 0.3
SS18-218ENST00000581021 ANKRD65E5RJM6 399 aa16.95■□□□□ 0.3
SS18-218ENST00000581021 MAGEB4O15481 346 aaPredicted RBP16.95■□□□□ 0.3
SS18-218ENST00000581021 XRCC2O43543 280 aa16.95■□□□□ 0.3
SS18-218ENST00000581021 LMX1BO60663 402 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms