RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TSSC4Q9Y5U2 329 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-217ENST00000580654 CAPN7Q9Y6W3 813 aa6.16□□□□□ -1.42
SMARCE1-217ENST00000580654 TRBV23-1A0A0A0MS06 115 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 A0A1W2PPL8 197 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 TCRBV4S1A1TA0A5B7 111 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 A6NDX4 124 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 OR6C6A6NF89 314 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 C12orf71A8MTZ7 269 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 RFXANKO14593 260 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 SGCEO43556 437 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 CHP2O43745 196 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 SLC22A3O75751 556 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 IGLV1-40P01703 118 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 TSPAN19P0C672 248 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 ZCCHC18P0CG32 403 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 UMPSP11172 480 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 SELLP14151 372 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 ETS2P15036 469 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 MSR1P21757 451 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 VDAC2P45880 294 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 RAB13P51153 203 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 DAP3P51398 398 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 NCALDP61601 193 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 CD47Q08722 323 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 NPTX1Q15818 432 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 BEND6Q5SZJ8 279 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 INTS11Q5TA45 600 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 HHATQ5VTY9 493 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 OTPQ5XKR4 325 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 NCR3LG1Q68D85 454 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 MZT2BQ6NZ67 158 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 NANOGNBQ7Z5D8 188 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 TMEM219Q86XT9 240 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 ZNF583Q96ND8 569 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 ZIM3Q96PE6 472 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 PRSS22Q9GZN4 317 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 TRIM36Q9NQ86 728 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 INIPQ9NRY2 104 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 TCF19Q9Y242 345 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 ANGPT4Q9Y264 503 aa6.15□□□□□ -1.42
SMARCE1-217ENST00000580654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 J3QW42 95 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 M0R3H8 397 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 RAMP3O60896 148 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 IGF2P01344 180 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 HIST1H2ABP04908 130 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 FAM153BP0C7A2 387 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 KRT4P19013 534 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 THBS3P49746 956 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 SCRN3Q0VDG4 424 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 RGNQ15493 299 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 WDR38Q5JTN6 314 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 ZNF613Q6PF04 617 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 TTC33Q6PID6 262 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 HIST3H2AQ7L7L0 130 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 HDDC2Q7Z4H3 204 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 NFKBIDQ8NI38 313 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 TCP10LQ8TDR4 215 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 LRRC8CQ8TDW0 803 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 HIST1H2ACQ93077 130 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 SEH1LQ96EE3 360 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 EAF1Q96JC9 268 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 MCHR1Q99705 422 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 PRSS27Q9BQR3 290 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 CPPED1Q9BRF8 314 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 ALG12Q9BV10 488 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 METTL8Q9H825 291 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 AIG1Q9NVV5 245 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 C1orf123Q9NWV4 160 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 THUMPD1Q9NXG2 353 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 SF3B6Q9Y3B4 125 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
SMARCE1-217ENST00000580654 GMNCA6NCL1 334 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 TMEM247A6NEH6 219 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 NPIPB13A6NJU9 1138 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 CPSF4LA6NMK7 179 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 VGLL3A8MV65 326 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 NPIPB4C9JG80 1138 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 M0R1W7 72 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 ACOT8O14734 319 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 ITM2AO43736 263 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 CLIC3O95833 236 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 TFF1P04155 84 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 SHBGP04278 402 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 HOXB9P17482 250 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 LBPP18428 481 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 FUT1P19526 365 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 TGM4P49221 684 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 LRRC74AQ0VAA2 488 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 IKZF1Q13422 519 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 GK2Q14410 553 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 RSPO1Q2MKA7 263 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 PLA1AQ53H76 456 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 ENTPD8Q5MY95 495 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 UNQ9370/PRO34162Q6UXP9 181 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 COLCA1Q6ZS62 124 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 C18orf65Q6ZTR6 163 aa6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 TRMT10CQ7L0Y3 403 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-217ENST00000580654 RBM45Q8IUH3 476 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms