RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NOP16Q9Y3C1 178 aaKnown RBP9.31□□□□□ -0.92
TOP3A-209ENST00000580095 AHCTF1Q8WYP5 2266 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 E9PLN8 166 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 HLA-AP01891 365 aaKnown RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 PMP2P02689 132 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 RLN2P04090 185 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 NMBP08949 121 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF735P0CB33 412 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 VAMP1P23763 118 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 BDKRB2P30411 391 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 AVPR2P30518 371 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 HRH1P35367 487 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 MECP2P51608 486 aaKnown RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 AKR1D1P51857 326 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 DCDP81605 110 aaKnown RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 TAF13Q15543 124 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 PLPPR5Q32ZL2 321 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 AWAT2Q6E213 333 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM71Q6P5X7 295 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 DNM1P34Q6PK57 102 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 KLHL24Q6TFL4 600 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 ANGPTL5Q86XS5 388 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 RBPMSQ93062 196 aaKnown RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 JSRP1Q96MG2 331 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF416Q9BWM5 594 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 MRPS17Q9Y2R5 130 aaKnown RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 TRAV14DV4A0A0A6YYC5 116 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 IGHV5-10-1A0A0J9YXX1 117 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 HSPB2A8KAH6 182 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 LDLRAD4O15165 306 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 RP2O75695 350 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 AKR1C4P17516 323 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 PI3P19957 117 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 CLDN6P56747 220 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 HSPB2Q16082 182 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 KCTD9Q7L273 389 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 CPEB2Q7Z5Q1 589 aaKnown RBP9.3□□□□□ -0.92
TOP3A-209ENST00000580095 UEVLDQ8IX04 471 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 DNASE2BQ8WZ79 361 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 MRGPRFQ96AM1 343 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 SPSB2Q99619 263 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 PDCD10Q9BUL8 212 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 POTEKPQ9BYX7 375 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 CST11Q9H112 138 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 WDR13Q9H1Z4 485 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 SDHAF2Q9NX18 166 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 SRPK3Q9UPE1 567 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 RHBDD3Q9Y3P4 386 aa9.3□□□□□ -0.92
TOP3A-209ENST00000580095 PMS2P1A4D2B8 440 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 APOC1P02654 83 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 GABRA1P14867 456 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 FSTP19883 344 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 RAB3AP20336 220 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 HSD11B1P28845 292 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 PTGDSP41222 190 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 OR3A4PP47883 348 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 SCAND1P57086 179 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM244Q5VVB8 128 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 GSG1LQ6UXU4 331 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 BEST3Q8N1M1 668 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 ADAD2Q8NCV1 583 aaKnown RBP9.29□□□□□ -0.92
TOP3A-209ENST00000580095 OR1M1Q8NGA1 313 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 MAFIPQ8WZ33 124 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 GNRHR2Q96P88 292 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 C1orf198Q9H425 327 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 RARRES3Q9UL19 164 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 KCNK7Q9Y2U2 307 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 ASPMQ8IZT6 3477 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 CPAMD8Q8IZJ3 1885 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 OR2AT4A6NND4 320 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM127O75204 238 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 MPIG6BO95866 241 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 LAP3P28838 519 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 CD96P40200 585 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 CXCL12P48061 93 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 MMP16P51512 607 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF121P58317 390 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-209ENST00000580095 PPP1R1AQ13522 171 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 RNASE10Q5GAN6 216 aaKnown RBP9.29□□□□□ -0.92
TOP3A-209ENST00000580095 FAM57BQ71RH2 274 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF546Q86UE3 836 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 DTX1Q86Y01 620 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 SPEM1Q8N4L4 309 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM229BQ8NBD8 167 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 WBP1Q96G27 269 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 LIN37Q96GY3 246 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-209ENST00000580095 RASL10BQ96S79 203 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 DEFB126Q9BYW3 111 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 GPR84Q9NQS5 396 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 WIF1Q9Y5W5 379 aa9.29□□□□□ -0.92
TOP3A-209ENST00000580095 SOCS1O15524 211 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ISG15P05161 165 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 QDPRP09417 244 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 UBCP0CG48 685 aaKnown RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF93P35789 620 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 CAPZA1P52907 286 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 DHODHQ02127 395 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms