RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 IL17RELQ6ZVW7 336 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 CPOQ8IVL8 374 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 ZNF454Q8N9F8 522 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 BHLHE23Q8NDY6 225 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 OR10AD1Q8NGE0 317 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 SPRYD4Q8WW59 207 aaPredicted RBP12.52□□□□□ -0.41
SS18-212ENST00000579061 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 GAL3ST1Q99999 423 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 ABHD6Q9BV23 337 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 AP4S1Q9Y587 144 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 CUBNO60494 3623 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 COL6A5A8TX70 2615 aa12.52□□□□□ -0.41
SS18-212ENST00000579061 FBN1P35555 2871 aaKnown RBP12.51□□□□□ -0.41
SS18-212ENST00000579061 ISPDA4D126 451 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 CD300LBA8K4G0 201 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 TMEM178BH3BS89 294 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 FSTL3O95633 263 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 SLC2A5P22732 501 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 CPT2P23786 658 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 BTG1P62324 171 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 ZNF92Q03936 586 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 LRRC28Q86X40 367 aaPredicted RBP12.51□□□□□ -0.41
SS18-212ENST00000579061 SPICQ8N5J4 248 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 OTOSQ8NHW6 89 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 ERGIC1Q969X5 290 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 SPSB4Q96A44 273 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 ZMYND19Q96E35 227 aaPredicted RBP12.51□□□□□ -0.41
SS18-212ENST00000579061 PRRG3Q9BZD7 231 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 GABARAPL1Q9H0R8 117 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 ENOPH1Q9UHY7 261 aa12.51□□□□□ -0.41
SS18-212ENST00000579061 ARHGAP32A7KAX9 2087 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 F5H5P2 479 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 G3V2T6 193 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 H0YL77 283 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 PLPP2O43688 288 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 GMDSO60547 372 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 CIB2O75838 187 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 SBK2P0C263 348 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 GATA3P23771 443 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 HSD11B1P28845 292 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 DDOSTP39656 456 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 MDH2P40926 338 aaKnown RBP12.5□□□□□ -0.41
SS18-212ENST00000579061 OPRL1P41146 370 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 CD200P41217 278 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 CX3CR1P49238 355 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 MMP16P51512 607 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 PTGES3Q15185 160 aaKnown RBP12.5□□□□□ -0.41
SS18-212ENST00000579061 SNAPC1Q16533 368 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 KLHL12Q53G59 568 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 GLYATL3Q5SZD4 288 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 TMEM236Q5W0B7 351 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 ASRGL1Q7L266 308 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 CXXC5Q7LFL8 322 aaKnown RBP12.5□□□□□ -0.41
SS18-212ENST00000579061 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 C1orf87Q8N0U7 546 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 MUC20Q8N307 709 aaPredicted RBP12.5□□□□□ -0.41
SS18-212ENST00000579061 KLHL36Q8N4N3 616 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 TEX29Q8N6K0 151 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 MDFIQ99750 246 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 LPAR2Q9HBW0 351 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 G6PC2Q9NQR9 355 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 KRT84Q9NSB2 600 aa12.5□□□□□ -0.41
SS18-212ENST00000579061 MRPL15Q9P015 296 aaKnown RBP12.5□□□□□ -0.41
SS18-212ENST00000579061 PPIAL4EA0A075B759 164 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PPIAL4CA0A0B4J2A2 164 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 GGT3PA6NGU5 568 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PPIAL4DF5H284 164 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 J3QLI3 93 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 FOXH1O75593 365 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PTBP3O95758 552 aaKnown RBP12.49□□□□□ -0.41
SS18-212ENST00000579061 PNPP00491 289 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 HLA-DPB1P04440 258 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 LYNP07948 512 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PPIAL4FP0DN26 164 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 SLC2A1P11166 492 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 CFL1P23528 166 aaKnown RBP12.49□□□□□ -0.41
SS18-212ENST00000579061 SRP14P37108 136 aaKnown RBP12.49□□□□□ -0.41
SS18-212ENST00000579061 RAD23AP54725 363 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PRSS12P56730 875 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 MAB21L1Q13394 359 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 ZMYND11Q15326 602 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 KDM4DQ6B0I6 523 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 SPATC1Q76KD6 591 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PRSS45Q7RTY3 260 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 KLBQ86Z14 1044 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 SPERTQ8NA61 448 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PLPP7Q8NBV4 271 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 OR52H1Q8NGJ2 320 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 OR2AE1Q8NHA4 323 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 Q8TCH9 128 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 NIPAL2Q9H841 368 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PATZ1Q9HBE1 687 aaKnown RBP12.49□□□□□ -0.41
SS18-212ENST00000579061 TVP23BQ9NYZ1 205 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 UBAP1Q9NZ09 502 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 PCDHB10Q9UN67 800 aa12.49□□□□□ -0.41
SS18-212ENST00000579061 POLR3KQ9Y2Y1 108 aaPredicted RBP12.49□□□□□ -0.41
SS18-212ENST00000579061 A0A0G2JMP0 313 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms