RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MGLLQ99685 303 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 ATF6BQ99941 703 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 ACTR6Q9GZN1 396 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 RNF121Q9H920 327 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 TRIM36Q9NQ86 728 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 PHF3Q92576 2039 aaKnown RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 IQCMA0A1B0GVH7 501 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 MAGEB4O15481 346 aaPredicted RBP6.94□□□□□ -1.3
COPS3-215ENST00000578317 PLPP2O43688 288 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ZG16O60844 167 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 SRSF10O75494 262 aaKnown RBP6.94□□□□□ -1.3
COPS3-215ENST00000578317 CLDN14O95500 239 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 LCKP06239 509 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 CCKARP32238 428 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TTKP33981 857 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 PEX19P40855 299 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TPTEP56180 551 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 MED22Q15528 200 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TSC22D1Q15714 1073 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TAB1Q15750 504 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TP53I3Q53FA7 332 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ZNF774Q6NX45 483 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 DRAM2Q6UX65 266 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 COLCA1Q6ZS62 124 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 PRSS45Q7RTY3 260 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 FAM220AQ7Z4H9 259 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 MDP1Q86V88 176 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ZNF584Q8IVC4 421 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 YIPF7Q8N8F6 280 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 AKR7LQ8NHP1 331 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ITFG2Q969R8 447 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 POM121L2Q96KW2 1035 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 SP140LQ9H930 580 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 NOX3Q9HBY0 568 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ACOXLQ9NUZ1 547 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 NDRG3Q9UGV2 375 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 GNG8Q9UK08 70 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 IKZF2Q9UKS7 526 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 LRP12Q9Y561 859 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 R4GMQ9 66 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 FREM1Q5H8C1 2179 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TENM4Q6N022 2769 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 COL12A1Q99715 3063 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 LOC100509620A0A075B734 347 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TMEM269A0A1B0GVZ9 245 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 E9PI62 339 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 PYCARD-AS1I3L0S3 204 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 PSMD9O00233 223 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 DOK2O60496 412 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 INMTO95050 263 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 LALBAP00709 142 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ISG15P05161 165 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 STOMP27105 288 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 HTR5AP47898 357 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 GP2P55259 537 aaKnown RBP6.94□□□□□ -1.3
COPS3-215ENST00000578317 BLMHQ13867 455 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 PPA1Q15181 289 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 CDSNQ15517 529 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TAF13Q15543 124 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 TIGD6Q17RP2 521 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ZNF829Q3KNS6 432 aaPredicted RBP6.94□□□□□ -1.3
COPS3-215ENST00000578317 ARMCX4Q5H9R4 360 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 DMKNQ6E0U4 476 aaPredicted RBP6.94□□□□□ -1.3
COPS3-215ENST00000578317 ZNF544Q6NX49 715 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 KLBQ86Z14 1044 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 C1orf174Q8IYL3 243 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 INTS1Q8N201 2190 aaKnown RBP6.94□□□□□ -1.3
COPS3-215ENST00000578317 OR1J2Q8NGS2 313 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 OR2G2Q8NGZ5 317 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 MOB1AQ9H8S9 216 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 ST6GALNAC2Q9UJ37 374 aa6.94□□□□□ -1.3
COPS3-215ENST00000578317 HIVEP3Q5T1R4 2406 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 PCNX1Q96RV3 2341 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 MYO7BQ6PIF6 2116 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 OR4C45A6NMZ5 311 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 FAM90A27PA6NNH2 459 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 M0R135 149 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 GPRIN2O60269 458 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 PNPP00491 289 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 ACSM4P0C7M7 580 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 ZNF35P13682 527 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 TUBG1P23258 451 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 APEX1P27695 318 aaKnown RBP6.93□□□□□ -1.3
COPS3-215ENST00000578317 HSD11B1P28845 292 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 PCSK6P29122 969 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 APLNRP35414 380 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 RGS6P49758 472 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 GDI2P50395 445 aaKnown RBP6.93□□□□□ -1.3
COPS3-215ENST00000578317 GTF2A1P52655 376 aaPredicted RBP6.93□□□□□ -1.3
COPS3-215ENST00000578317 TUBA1BP68363 451 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 ALKBH1Q13686 389 aaKnown RBP6.93□□□□□ -1.3
COPS3-215ENST00000578317 RAB39AQ14964 217 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 CDK5R1Q15078 307 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 NEDD8Q15843 81 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 ARL9Q6T311 187 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 ZNF704Q6ZNC4 412 aaPredicted RBP6.93□□□□□ -1.3
COPS3-215ENST00000578317 TUBA1AQ71U36 451 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 CATSPERDQ86XM0 798 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 PHC2Q8IXK0 858 aa6.93□□□□□ -1.3
COPS3-215ENST00000578317 MS4A15Q8N5U1 240 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms