RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PSG7Q13046 419 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 EIF2B1Q14232 305 aaKnown RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 TRIP10Q15642 601 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 RGS7BPQ6MZT1 257 aaPredicted RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 COLCA1Q6ZS62 124 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ZBTB49Q6ZSB9 765 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 MEPCEQ7L2J0 689 aaKnown RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 SHFQ7M4L6 423 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 TGIF2LYQ8IUE0 185 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 GALNT4Q8N4A0 578 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF525Q8N782 197 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 OR1J2Q8NGS2 313 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 OR2AJ1Q8NGZ0 328 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 OTOSQ8NHW6 89 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 FAM81AQ8TBF8 368 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 NRG4Q8WWG1 115 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 EME1Q96AY2 570 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 PLEKHA8Q96JA3 519 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 INTS14Q96SY0 518 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 C9orf16Q9BUW7 83 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ABHD6Q9BV23 337 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 KRTAP4-6Q9BYQ5 205 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 HDHD2Q9H0R4 259 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 CXorf56Q9H5V9 222 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ADGRL4Q9HBW9 690 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 SMURF1Q9HCE7 757 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 PTTG3PQ9NZH4 202 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF319Q9P2F9 582 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ATPIF1Q9UII2 106 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 NDRG4Q9ULP0 352 aaKnown RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 CUBNO60494 3623 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ZSCAN5BA6NJL1 495 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 F5H5K5 113 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 LYNX1G3V0Z9 82 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 PSMD9O00233 223 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SSX4O60224 188 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 ENTPD6O75354 484 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 CLIC3O95833 236 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 IGHV3-13P01766 116 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 LYNX1P0DP58 116 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 OPRL1P41146 370 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 RAD52P43351 418 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 MAGEB1P43366 347 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 PPOXP50336 477 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 MECP2P51608 486 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 PRKXP51817 358 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 RPS7P62081 194 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SNRPD2P62316 118 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SRSF3P84103 164 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 GGTLC2Q14390 218 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SLC35D3Q5M8T2 416 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 OGFRL1Q5TC84 451 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 NXNL2Q5VZ03 156 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 LRRN1Q6UXK5 716 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 Q6ZR03 302 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SSX6Q7RTT6 188 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 PRSS45Q7RTY3 260 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 ENTHD1Q8IYW4 607 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SYNPRQ8TBG9 265 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 RNF133Q8WVZ7 376 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 APH1BQ8WW43 257 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 CMBLQ96DG6 245 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 Q96MF0 132 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF582Q96NG8 517 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 C1QTNF5Q9BXJ0 243 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 BCL2L14Q9BZR8 327 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 DLL4Q9NR61 685 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 CENPMQ9NSP4 180 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 TBCCD1Q9NVR7 557 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 FAM118AQ9NWS6 357 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 TAAR3PQ9P1P4 343 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 SPEF1Q9Y4P9 236 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 RTTNQ86VV8 2226 aa8.06□□□□□ -1.12
NPLOC4-219ENST00000576713 ARFGEF3Q5TH69 2177 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 HEATR1Q9H583 2144 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 IGHV4-30-2A0A087WSY4 118 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 A0A096LNT2 108 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 A0A1W2PPW3 197 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 M0R135 149 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 CASQ2O14958 399 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 CD99P14209 185 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 ALOX5APP20292 161 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 EVX1P49640 407 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 KLF3P57682 345 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 RPS23P62266 143 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 TNK1Q13470 666 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 GLYATL3Q5SZD4 288 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 MBNL2Q5VZF2 373 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 SLC16A9Q7RTY1 509 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 C10orf67Q8IYJ2 551 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 MAPK1IP1LQ8NDC0 245 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 OR2AE1Q8NHA4 323 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 THEM6Q8WUY1 208 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF799Q96GE5 643 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 SMR3AQ99954 134 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 VRK1Q99986 396 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 SOX7Q9BT81 388 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 MSL2Q9HCI7 577 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 SLCO1C1Q9NYB5 712 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms