RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PPP1R35Q8TAP8 253 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 STON2Q8WXE9 905 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 ACOT11Q8WXI4 607 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLCO4A1Q96BD0 722 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 SH3GL1Q99961 368 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLC22A4Q9H015 551 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 TMBIM4Q9HC24 238 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 NRIP3Q9NQ35 241 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 RHCGQ9UBD6 479 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 SNX13Q9Y5W8 968 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 BTBD17A6NE02 478 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 CD300LBA8K4G0 201 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 F5H5K5 113 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 J3KTA2 159 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 DCTN6O00399 190 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 PPP1R3DO95685 299 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 GABRA5P31644 462 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 CDKN2AP42771 156 aaKnown RBP8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 YAP1P46937 504 aaKnown RBP8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 POU4F2Q12837 409 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 MALLQ13021 153 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 KRR1Q13601 381 aaKnown RBP8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR8G1Q15617 311 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 MEP1BQ16820 701 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 VAX1Q5SQQ9 334 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 GPR139Q6DWJ6 353 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 ERICH5Q6P6B1 374 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 C11orf88Q6PI97 169 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZNF826PQ6ZT77 177 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 PTCHD4Q6ZW05 846 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 FGFRL1Q8N441 504 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 GCSAMQ8N6F7 178 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 Q8N7P7 452 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR8J3Q8NGG0 315 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR5R1Q8NH85 324 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 SPRYD4Q8WW59 207 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 TNFRSF14Q92956 283 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 GPX7Q96SL4 187 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 FNDC11Q9BVV2 318 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 PPA2Q9H2U2 334 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 NECAP2Q9NVZ3 263 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 RPS6KA6Q9UK32 745 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 FOXJ3Q9UPW0 622 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 SIGLEC9Q9Y336 463 aa8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 NOP16Q9Y3C1 178 aaKnown RBP8.17□□□□□ -1.1
CALCOCO2-227ENST00000575560 IGLV1-36A0A0B4J1U3 117 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 A0A1B0GW55 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ANKRD61A6NGH8 418 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 FXYD1O00168 92 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 SOCS2O14508 198 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 NPFFO15130 113 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 TXNDC12O95881 172 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 LCATP04180 440 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L5P0CJ88 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L6P0CJ89 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L7P0CJ90 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 MDH1P40925 334 aaKnown RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 GPR4P46093 362 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 GUCA2AQ02747 115 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ECH1Q13011 328 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 LRRC23Q53EV4 343 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLC18B1Q6NT16 456 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 PGM2L1Q6PCE3 622 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZNF730Q6ZMV8 503 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 CFAP77Q6ZQR2 320 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 C1orf122Q6ZSJ8 110 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 TSEN54Q7Z6J9 526 aaKnown RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ADCK1Q86TW2 530 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 SPERTQ8NA61 448 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLC26A10Q8NG04 563 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 TSSK2Q96PF2 358 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ADAT1Q9BUB4 502 aaKnown RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 PNRC2Q9NPJ4 139 aaKnown RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 SIRT7Q9NRC8 400 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 AURKAIP1Q9NWT8 199 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 C1orf123Q9NWV4 160 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 ONECUT1Q9UBC0 465 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 B9D1Q9UPM9 204 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 SIGLEC7Q9Y286 467 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 POLR1DQ9Y2S0 133 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 IER3IP1Q9Y5U9 82 aa8.16□□□□□ -1.1
CALCOCO2-227ENST00000575560 IGHV3OR15-7A0A075B7D8 119 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 MEGF11A6BM72 1044 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 XPNPEP2O43895 674 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 NDUFB2O95178 105 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 NPPAP01160 153 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 IFNW1P05000 195 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 GRPP07492 148 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 EEF1B2P24534 225 aaKnown RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 CRABP1P29762 137 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 SAA4P35542 130 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms