RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CASQ2O14958 399 aaPredicted RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 ENTPD6O75354 484 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 IGHV1-46P01743 117 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 HPXP02790 462 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 OR2T7P0C7T2 308 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 CFL1P23528 166 aaKnown RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 MTNR1AP48039 350 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 RIDAP52758 137 aaKnown RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 TMEM255AQ5JRV8 349 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 GLYATL3Q5SZD4 288 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 OGFRL1Q5TC84 451 aaPredicted RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 ZNF322Q6U7Q0 402 aaPredicted RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 ENTHD1Q8IYW4 607 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 ZNF679Q8IYX0 411 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 OR2Z1Q8NG97 314 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 OR13G1Q8NGZ3 307 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 OR2T27Q8NH04 317 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 GTF3AQ92664 365 aaKnown RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 OR8B4Q96RC9 309 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 TBX5Q99593 518 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 REG4Q9BYZ8 158 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 TTTY10Q9BZA0 68 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 TMEM100Q9NV29 134 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 COPS3Q9UNS2 423 aa12.96□□□□□ -0.33
LITAF-217ENST00000575426 FLNAP21333 2647 aaKnown RBP12.96□□□□□ -0.33
LITAF-217ENST00000575426 CR1P17927 2039 aa12.96□□□□□ -0.34
LITAF-217ENST00000575426 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.34
LITAF-217ENST00000575426 AKAP9Q99996 3911 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 YLPM1P49750 1951 aaKnown RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 IGHV4-30-2A0A087WSY4 118 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 ZSCAN5BA6NJL1 495 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 IQCF6A8MYZ5 107 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 PSMD9O00233 223 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 ADH4P08319 380 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 TNFAIP6P98066 277 aaPredicted RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 IL5RAQ01344 420 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 ROM1Q03395 351 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 ZNF92Q03936 586 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 EGR3Q06889 387 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 ZNF829Q3KNS6 432 aaPredicted RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 BHLHE23Q8NDY6 225 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 SETD9Q8NE22 299 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 OR10H4Q8NGA5 316 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 OR2AE1Q8NHA4 323 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 RHOXF1Q8NHV9 184 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 ELMOD3Q96FG2 381 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 DLL4Q9NR61 685 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 NKX1-2Q9UD57 310 aaPredicted RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 NOP16Q9Y3C1 178 aaKnown RBP12.95□□□□□ -0.34
LITAF-217ENST00000575426 PCDHGB1Q9Y5G3 927 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 HIVEP1P15822 2718 aa12.95□□□□□ -0.34
LITAF-217ENST00000575426 F8P00451 2351 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 IGHV1-69-2A0A0G2JMI3 117 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 TMEM269A0A1B0GVZ9 245 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 ACOD1A6NK06 481 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 LYNX1G3V0Z9 82 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 DLGAP1O14490 977 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 NCR1O76036 304 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 APOL3O95236 402 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 KRT8P05787 483 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 INHBBP09529 407 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 LYNX1P0DP58 116 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 TNFRSF1AP19438 455 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 ACHEP22303 614 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 COL8A2P25067 703 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 DCTDP32321 178 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 PSMA6P60900 246 aaKnown RBP12.94□□□□□ -0.34
LITAF-217ENST00000575426 GFOD2Q3B7J2 385 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 RNFT2Q96EX2 444 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 REEP6Q96HR9 211 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 MYCBPQ99417 103 aaPredicted RBP12.94□□□□□ -0.34
LITAF-217ENST00000575426 CHODLQ9H9P2 273 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 RNPEPL1Q9HAU8 725 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
LITAF-217ENST00000575426 CD300LBA8K4G0 201 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 CDC14BO60729 498 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 CD55P08174 381 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 GABRB1P18505 474 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 DDOSTP39656 456 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 CRYBB2P43320 205 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 NR4A2P43354 598 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 ACTC1P68032 377 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 ACTA1P68133 377 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 SNCBQ16143 134 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 HFEQ30201 348 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 ZNF691Q5VV52 312 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 Q6ZR03 302 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 PRSS45Q7RTY3 260 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 LURAP1LQ8IV03 231 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 CIARTQ8N365 385 aaPredicted RBP12.93□□□□□ -0.34
LITAF-217ENST00000575426 YIPF7Q8N8F6 280 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 SGK3Q96BR1 496 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 MRPL48Q96GC5 212 aaKnown RBP12.93□□□□□ -0.34
LITAF-217ENST00000575426 COX4I2Q96KJ9 171 aa12.93□□□□□ -0.34
LITAF-217ENST00000575426 SLC30A2Q9BRI3 323 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms