RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 COPS4Q9BT78 406 aa9.49□□□□□ -0.89
RPAIN-214ENST00000574003 PPP1R3EQ9H7J1 279 aa9.49□□□□□ -0.89
RPAIN-214ENST00000574003 ESM1Q9NQ30 184 aa9.49□□□□□ -0.89
RPAIN-214ENST00000574003 DDX28Q9NUL7 540 aaKnown RBP9.49□□□□□ -0.89
RPAIN-214ENST00000574003 PDP1Q9P0J1 537 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-214ENST00000574003 KCNG2Q9UJ96 466 aa9.49□□□□□ -0.89
RPAIN-214ENST00000574003 DHRS12A0PJE2 317 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 GGT3PA6NGU5 568 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 CD300LBA8K4G0 201 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 H3BN98 237 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 J3QLI3 93 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 FAM20BO75063 409 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 FSHBP01225 129 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF12P17014 697 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 FMO3P31513 532 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 MDH2P40926 338 aaKnown RBP9.48□□□□□ -0.89
RPAIN-214ENST00000574003 SLC25A1P53007 311 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 MALLQ13021 153 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF154Q13106 437 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 EIF2B1Q14232 305 aaKnown RBP9.48□□□□□ -0.89
RPAIN-214ENST00000574003 TAF13Q15543 124 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-214ENST00000574003 SLC27A4Q6P1M0 643 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 TRPM8Q7Z2W7 1104 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 ERI1Q8IV48 349 aaKnown RBP9.48□□□□□ -0.89
RPAIN-214ENST00000574003 OR6N2Q8NGY6 317 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 NANPQ8TBE9 248 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 DUX5Q96PT3 197 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 OR51V1Q9H2C8 321 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 DNAJC27Q9NZQ0 273 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 INSIG2Q9Y5U4 225 aa9.48□□□□□ -0.89
RPAIN-214ENST00000574003 A0A1B0GWJ7 208 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 RIIAD1A6NNX1 92 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 HAX1O00165 279 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 DYNC1I1O14576 645 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 TBX1O43435 398 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 SELENOFO60613 162 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 RPS2P15880 293 aaKnown RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF3P17036 446 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 OTX1P32242 354 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 CD80P33681 288 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 GRK5P34947 590 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 RAD23AP54725 363 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 POU4F2Q12837 409 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 GINS1Q14691 196 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 OR8G1Q15617 311 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 PCK2Q16822 640 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ESCO2Q56NI9 601 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 TMEM236Q5W0B7 351 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 SFRP4Q6FHJ7 346 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 DPY19L4Q7Z388 723 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 SPATA24Q86W54 205 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 KLBQ86Z14 1044 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 SIGLECL1Q8N7X8 197 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ZDHHC22Q8N966 263 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 BBS1Q8NFJ9 593 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 OR56B2PQ8NGI1 322 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 TEX47Q8TBZ9 253 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF418Q8TF45 676 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 SLC7A6OSQ96CW6 309 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ZMYND19Q96E35 227 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 KCNJ15Q99712 375 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ADAT1Q9BUB4 502 aaKnown RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 SSBP3Q9BWW4 388 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-214ENST00000574003 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 CMC2Q9NRP2 79 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 FAM53CQ9NYF3 392 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF69Q9UC07 566 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 BAIAP2Q9UQB8 552 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 KLHDC2Q9Y2U9 406 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 PPIAL4AQ9Y536 164 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
RPAIN-214ENST00000574003 PPIAL4EA0A075B759 164 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 AQP12BA6NM10 295 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 A8MXK9 166 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 PPIAL4DF5H284 164 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 GNGT2O14610 69 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 IFNGP01579 166 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 ANXA2P07355 339 aaKnown RBP9.46□□□□□ -0.9
RPAIN-214ENST00000574003 GRPP07492 148 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 PPIAL4FP0DN26 164 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 IGHV4-38-2P0DP08 117 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 GSTT1P30711 240 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 CD200P41217 278 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 CX3CR1P49238 355 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 HCCSP53701 268 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 HILS1P60008 231 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 ELF3P78545 371 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-214ENST00000574003 PAX2Q02962 417 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF404Q494X3 552 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 PLBD1Q6P4A8 553 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 DRAM2Q6UX65 266 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 CD300LDQ6UXZ3 194 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 FAM57BQ71RH2 274 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 AQP12AQ8IXF9 295 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 BPIFB2Q8N4F0 458 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 BCAS4Q8TDM0 211 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms