RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 BATF2Q8N1L9 274 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 PSMF1Q92530 271 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 PELI1Q96FA3 418 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 SCGB3A2Q96PL1 93 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 TMEM246Q9BRR3 403 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ZNF318Q5VUA4 2279 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 TEX13DA0A0J9YY54 714 aaPredicted RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 LRRC30A6NM36 301 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 CDRT15L2A8MXV6 281 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 DISC1C4P0D8 188 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 FAHP16930 419 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 MTNR1BP49286 362 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 LSM6P62312 80 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 EGR4Q05215 589 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 IKZF1Q13422 519 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR8B8Q15620 311 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 RNASE10Q5GAN6 216 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 DEGS2Q6QHC5 323 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 PLXDC2Q6UX71 529 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 TSEN54Q7Z6J9 526 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 NRARPQ7Z6K4 114 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 NKAIN3Q8N8D7 197 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR51D1Q8NGF3 324 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 KCNG3Q8TAE7 436 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 SELENOIQ9C0D9 397 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ABRACLQ9P1F3 81 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 UGT2A1Q9Y4X1 527 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 PCDHGA9Q9Y5G4 932 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR14I1A6ND48 311 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 WRBO00258 174 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 SMAD9O15198 467 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 ADAM11O75078 769 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 RAF1P04049 648 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 LIMS3P0CW19 117 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 LIMS4P0CW20 117 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 SNTB2Q13425 540 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 POU4F3Q15319 338 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 PLEKHN1Q494U1 663 aaPredicted RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 OLFML2AQ68BL7 652 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 LYSMD2Q8IV50 215 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OPALINQ96PE5 141 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 PSD2Q9BQI7 771 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 SRXN1Q9BYN0 137 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 MRPL15Q9P015 296 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 LAMA3Q16787 3333 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 B4DXG7 233 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 CLEC2LP0C7M8 214 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 MRPS34P82930 218 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 BDH1Q02338 343 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 TPBGQ13641 420 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ZNF181Q2M3W8 571 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 RAB12Q6IQ22 244 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 SFXN4Q6P4A7 337 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR2AE1Q8NHA4 323 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 DOK1Q99704 481 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OPN3Q9H1Y3 402 aaPredicted RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 ABCG5Q9H222 651 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ERRFI1Q9UJM3 462 aaPredicted RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 KCNS2Q9ULS6 477 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ZGRF1Q86YA3 2104 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 TUBAL3A6NHL2 446 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 MS4A18H0YCH9 400 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 HSPB6O14558 160 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 CPEP16870 476 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 PPA1Q15181 289 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 MS4A18Q3C1V0 323 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ALKBH6Q3KRA9 238 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 SLC25A24Q6NUK1 477 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 SYT9Q86SS6 491 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR8H3Q8N146 312 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ADPRHL1Q8NDY3 354 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR6M1Q8NGM8 313 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ZPLD1Q8TCW7 415 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 OR2M2Q96R28 347 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ZCCHC4Q9H5U6 513 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 ESRP2Q9H6T0 727 aaKnown RBP8.94□□□□□ -0.98
SMG6-213ENST00000573166 AKIP1Q9NQ31 210 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 TMEM38BQ9NVV0 291 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 HSPB11Q9Y547 144 aa8.94□□□□□ -0.98
SMG6-213ENST00000573166 CHD7Q9P2D1 2997 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 CDK2AP1O14519 115 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 HPGDSO60760 199 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 ONECUT2O95948 504 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 VEGFCP49767 419 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 ACTBP60709 375 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 ACTG1P63261 375 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 TSC22D1Q15714 1073 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 OR2T2Q6IF00 324 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 GLIPR1L1Q6UWM5 242 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 DTX1Q86Y01 620 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 FADS6Q8N9I5 356 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 CPEB3Q8NE35 698 aaKnown RBP8.93□□□□□ -0.98
SMG6-213ENST00000573166 DNAAF1Q8NEP3 725 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 DEFB108BQ8NET1 73 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 POC1BQ8TC44 478 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 DYNC2LI1Q8TCX1 351 aa8.93□□□□□ -0.98
SMG6-213ENST00000573166 ORAI1Q96D31 301 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms