RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TMEM135Q86UB9 458 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 SKA3Q8IX90 412 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 GPD1LQ8N335 351 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 OR52E4Q8NGH9 312 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 OR1L3Q8NH93 324 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 STOML3Q8TAV4 291 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 GATAD1Q8WUU5 269 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 SMIM12Q96EX1 92 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 DYNLL2Q96FJ2 89 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 MRAP2Q96G30 205 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 ANKRD36BP1Q96IX9 119 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 MAGEB18Q96M61 343 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 RASL11BQ9BPW5 248 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 SEC22CQ9BRL7 303 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 OSBPL11Q9BXB4 747 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 PECRQ9BY49 303 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 BIN3Q9NQY0 253 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 TAS2R13Q9NYV9 303 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 VPREB3Q9UKI3 123 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 OR51B2Q9Y5P1 312 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC22A7Q9Y694 548 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM56-RWDD3S4R434 201 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 TAF1P21675 1872 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 SYNMO15061 1565 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 CCNB3Q8WWL7 1395 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 M0R1B8 84 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SULT2B1O00204 365 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TNFRSF11BO00300 401 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 KPNA4O00629 521 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 RAD51CO43502 376 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 BUB3O43684 328 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 MGRN1O60291 552 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 CNMDO75829 334 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 HPRT1P00492 218 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ARG1P05089 322 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 C1GALT1C1LP0DN25 315 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SNHG28P0DPA3 235 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 RPL35AP18077 110 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 BCL3P20749 454 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 NR4A1P22736 598 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 CHRNB4P30926 498 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 PYCR1P32322 319 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 RAB38P57729 211 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF121P58317 390 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TAS2R41P59536 307 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SNAP25P60880 206 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 CDC42P60953 191 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 PPP1CBP62140 327 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 IL5RAQ01344 420 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TWF1Q12792 350 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF155Q12901 538 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 FOXF2Q12947 444 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 CLINT1Q14677 625 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 GINS1Q14691 196 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 OR1Q1Q15612 314 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TRIP6Q15654 476 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 LTB4RQ15722 352 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ARHGAP11BQ3KRB8 267 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 OTUD1Q5VV17 481 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ZFP1Q6P2D0 407 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 WDR74Q6RFH5 385 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SMARCD3Q6STE5 483 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM207Q6UWW9 146 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 GFRALQ6UXV0 394 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 APOOLQ6UXV4 268 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TFAP2EQ6VUC0 442 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 Q6ZSN1 163 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 KIRREL3Q8IZU9 778 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 DAW1Q8N136 415 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SVOPLQ8N434 492 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 OR10G3Q8NGC4 313 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 OR10K1Q8NGX5 313 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SPATA3Q8NHX4 192 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 Q8WTZ3 238 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 APOBEC4Q8WW27 367 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 C11orf40Q8WZ69 217 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TMBIM1Q969X1 311 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 DDIT4LQ96D03 193 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 DUX3Q96PT4 197 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 MRPL45Q9BRJ2 306 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC19A3Q9BZV2 496 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 MIXL1Q9H2W2 232 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 PLEKHA3Q9HB20 300 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 SPANXA1Q9NS26 97 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 AURKAIP1Q9NWT8 199 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ELOVL5Q9NYP7 299 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 TAS2R16Q9NYV7 291 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 MSRB1Q9NZV6 116 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 NTNG1Q9Y2I2 539 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 LSM5Q9Y4Y9 91 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 HSPB11Q9Y547 144 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 NCOA1Q15788 1441 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 RIMS2Q9UQ26 1411 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 ZBED9Q6R2W3 1325 aa4.19□□□□□ -1.74
TOPBP1-210ENST00000572787 PLEKHG1Q9ULL1 1385 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 A0A0G2JMP0 313 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 METTL15A6NJ78 407 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 CEACAM18A8MTB9 384 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF878C9JN71 531 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 LOC110117498-PIK3R3F6TDL0 507 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms