RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SLC3A1Q07837 685 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 FAM166AQ6J272 317 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 SLC16A9Q7RTY1 509 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 TMEM163Q8TC26 289 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 RAB1CQ92928 201 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 OR2V2Q96R30 315 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 SLC30A2Q9BRI3 323 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 SP140LQ9H930 580 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 TMEM100Q9NV29 134 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 LAMP5Q9UJQ1 280 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 WIPI2Q9Y4P8 454 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 HIVEP2P31629 2446 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 NF1P21359 2839 aa17.51■□□□□ 0.39
CHMP6-204ENST00000572778 GGT3PA6NGU5 568 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 APOC1P02654 83 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 HNRNPA0Q13151 305 aaKnown RBP17.5■□□□□ 0.39
CHMP6-204ENST00000572778 RHOUQ7L0Q8 258 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 MEPCEQ7L2J0 689 aaKnown RBP17.5■□□□□ 0.39
CHMP6-204ENST00000572778 GABARAPL3Q9BY60 117 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 S100A14Q9HCY8 104 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 BRD7Q9NPI1 651 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 KLHDC2Q9Y2U9 406 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 ORC6Q9Y5N6 252 aa17.5■□□□□ 0.39
CHMP6-204ENST00000572778 CD300LBA8K4G0 201 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 EI24O14681 340 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 XRCC2O43543 280 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 LMX1BO60663 402 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 CRLF1O75462 422 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 HLA-DPB1P04440 258 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 ZNF121P58317 390 aaPredicted RBP17.49■□□□□ 0.39
CHMP6-204ENST00000572778 EFNB1P98172 346 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 NXNL2Q5VZ03 156 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 LRRN1Q6UXK5 716 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 FAM57BQ71RH2 274 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 PEG10Q86TG7 708 aaKnown RBP17.49■□□□□ 0.39
CHMP6-204ENST00000572778 LINC01356Q8N9X3 169 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 REPIN1Q9BWE0 567 aaKnown RBP17.49■□□□□ 0.39
CHMP6-204ENST00000572778 YIPF3Q9GZM5 350 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 KCNS2Q9ULS6 477 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 PPP1R3CQ9UQK1 317 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 TLN2Q9Y4G6 2542 aa17.49■□□□□ 0.39
CHMP6-204ENST00000572778 C2CD3Q4AC94 2353 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 IGHV3-64DA0A0J9YX35 117 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 F5H5P2 479 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 MLNRO43193 412 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 ALPLP05186 524 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 ALOX5APP20292 161 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 RBMXP38159 391 aaKnown RBP17.48■□□□□ 0.39
CHMP6-204ENST00000572778 SRP9P49458 86 aaKnown RBP17.48■□□□□ 0.39
CHMP6-204ENST00000572778 RAD23AP54725 363 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 TIGD6Q17RP2 521 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 AADACL4Q5VUY2 407 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 KRT77Q7Z794 578 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 PGAM5Q96HS1 289 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 MEGF10Q96KG7 1140 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 TMEM106BQ9NUM4 274 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 DCAF16Q9NXF7 216 aa17.48■□□□□ 0.39
CHMP6-204ENST00000572778 FN1P02751 2386 aaKnown RBP17.47■□□□□ 0.39
CHMP6-204ENST00000572778 ISPDA4D126 451 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 SLC22A31A6NKX4 558 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 CA6P23280 308 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 GFOD2Q3B7J2 385 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 KCTD18Q6PI47 426 aaPredicted RBP17.47■□□□□ 0.39
CHMP6-204ENST00000572778 GID4Q8IVV7 300 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 CBR4Q8N4T8 237 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 OR52H1Q8NGJ2 320 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 SGK3Q96BR1 496 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 REEP6Q96HR9 211 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 CNN2Q99439 309 aaKnown RBP17.47■□□□□ 0.39
CHMP6-204ENST00000572778 OR10A2Q9H208 303 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 OPA3Q9H6K4 179 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 USE1Q9NZ43 259 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 ABCA1O95477 2261 aa17.47■□□□□ 0.39
CHMP6-204ENST00000572778 ANK3Q12955 4377 aaKnown RBP17.47■□□□□ 0.39
CHMP6-204ENST00000572778 PSMD9O00233 223 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 ALDH3A2P51648 485 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 CDH15P55291 814 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 LMO4P61968 165 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 OR8G1Q15617 311 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 ZIK1Q3SY52 487 aaPredicted RBP17.46■□□□□ 0.39
CHMP6-204ENST00000572778 ZNF771Q7L3S4 317 aaPredicted RBP17.46■□□□□ 0.39
CHMP6-204ENST00000572778 PRSS45Q7RTY3 260 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 OR56B2PQ8NGI1 322 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 GAL3ST1Q99999 423 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 SLC22A4Q9H015 551 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 NIPAL2Q9H841 368 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 LPAR2Q9HBW0 351 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 GCM1Q9NP62 436 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 LRP12Q9Y561 859 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 NPTNQ9Y639 398 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 TMEM14AQ9Y6G1 99 aa17.46■□□□□ 0.39
CHMP6-204ENST00000572778 CHD3Q12873 2000 aaKnown RBP17.46■□□□□ 0.39
CHMP6-204ENST00000572778 NSD1Q96L73 2696 aaPredicted RBP17.46■□□□□ 0.39
CHMP6-204ENST00000572778 A0A1B0GWJ7 208 aa17.45■□□□□ 0.38
CHMP6-204ENST00000572778 B4DSR2 109 aa17.45■□□□□ 0.38
CHMP6-204ENST00000572778 BAG2O95816 211 aa17.45■□□□□ 0.38
CHMP6-204ENST00000572778 SBK2P0C263 348 aa17.45■□□□□ 0.38
CHMP6-204ENST00000572778 CDC42P60953 191 aa17.45■□□□□ 0.38
CHMP6-204ENST00000572778 PQLC1Q8N2U9 271 aa17.45■□□□□ 0.38
CHMP6-204ENST00000572778 ZNF420Q8TAQ5 688 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms