RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 C3orf56Q8N813 242 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 RAB40AQ8WXH6 277 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 ZNF799Q96GE5 643 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 NTN4Q9HB63 628 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 ACTR3BQ9P1U1 418 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 KIR2DS1A0A191URI9 304 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 DNAJC9-AS1A6NH13 148 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 C22orf46C9J442 243 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 PTBP3O95758 552 aaKnown RBP15.09■□□□□ 0.01
CHD3-214ENST00000572579 T-ENOLP0DO92 83 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 PSMB10P40306 273 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 TPTEP56180 551 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 CRMP1Q14194 572 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 SPATS1Q496A3 300 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 ARMCX4Q5H9R4 360 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 LINC01590Q5TEZ4 76 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 DCXRQ7Z4W1 244 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 CELF2-AS1Q8N7Q2 184 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 AQP11Q8NBQ7 271 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 PROKR2Q8NFJ6 384 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 UPRTQ96BW1 309 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 TSSK6Q9BXA6 273 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 CTSZQ9UBR2 303 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 MIOXQ9UGB7 285 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 OR5V1Q9UGF6 321 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 KCNG2Q9UJ96 466 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 COMMD3-BMI1R4GMX3 469 aa15.09■□□□□ 0.01
CHD3-214ENST00000572579 MDFIC2A0A1B0GVS7 189 aa15.08■□□□□ 0
CHD3-214ENST00000572579 B2RBV5 119 aa15.08■□□□□ 0
CHD3-214ENST00000572579 PLATP00750 562 aa15.08■□□□□ 0
CHD3-214ENST00000572579 HKR1P10072 659 aa15.08■□□□□ 0
CHD3-214ENST00000572579 SLC2A1P11166 492 aa15.08■□□□□ 0
CHD3-214ENST00000572579 ZNF823P16415 610 aa15.08■□□□□ 0
CHD3-214ENST00000572579 CPT2P23786 658 aa15.08■□□□□ 0
CHD3-214ENST00000572579 PRTN3P24158 256 aa15.08■□□□□ 0
CHD3-214ENST00000572579 WDR25Q64LD2 544 aaPredicted RBP15.08■□□□□ 0
CHD3-214ENST00000572579 SPRYD4Q8WW59 207 aaPredicted RBP15.08■□□□□ 0
CHD3-214ENST00000572579 NEIL1Q96FI4 390 aaPredicted RBP15.08■□□□□ 0
CHD3-214ENST00000572579 MRI1Q9BV20 369 aa15.08■□□□□ 0
CHD3-214ENST00000572579 PPP1R3EQ9H7J1 279 aa15.08■□□□□ 0
CHD3-214ENST00000572579 ARMC1Q9NVT9 282 aa15.08■□□□□ 0
CHD3-214ENST00000572579 U3KQV3 271 aa15.08■□□□□ 0
CHD3-214ENST00000572579 PKD1L1Q8TDX9 2849 aa15.07■□□□□ 0
CHD3-214ENST00000572579 ZNF593O00488 134 aaPredicted RBP15.07■□□□□ 0
CHD3-214ENST00000572579 CCNB2O95067 398 aa15.07■□□□□ 0
CHD3-214ENST00000572579 SOX14O95416 240 aa15.07■□□□□ 0
CHD3-214ENST00000572579 PPIAL4GP0DN37 164 aa15.07■□□□□ 0
CHD3-214ENST00000572579 PITPNBP48739 271 aa15.07■□□□□ 0
CHD3-214ENST00000572579 PRKXP51817 358 aa15.07■□□□□ 0
CHD3-214ENST00000572579 SLC25A1P53007 311 aa15.07■□□□□ 0
CHD3-214ENST00000572579 GNB2P62879 340 aa15.07■□□□□ 0
CHD3-214ENST00000572579 MALLQ13021 153 aa15.07■□□□□ 0
CHD3-214ENST00000572579 SLC9A3R2Q15599 337 aa15.07■□□□□ 0
CHD3-214ENST00000572579 SFRP4Q6FHJ7 346 aaPredicted RBP15.07■□□□□ 0
CHD3-214ENST00000572579 C9orf139Q6ZV77 190 aa15.07■□□□□ 0
CHD3-214ENST00000572579 OR52L1Q8NGH7 329 aa15.07■□□□□ 0
CHD3-214ENST00000572579 OR2T4Q8NH00 348 aa15.07■□□□□ 0
CHD3-214ENST00000572579 NIPSNAP1Q9BPW8 284 aa15.07■□□□□ 0
CHD3-214ENST00000572579 PCDHGB1Q9Y5G3 927 aa15.07■□□□□ 0
CHD3-214ENST00000572579 LRRC30A6NM36 301 aa15.06■□□□□ 0
CHD3-214ENST00000572579 SPI1P17947 270 aa15.06■□□□□ 0
CHD3-214ENST00000572579 BAMBIQ13145 260 aa15.06■□□□□ 0
CHD3-214ENST00000572579 OR8G1Q15617 311 aa15.06■□□□□ 0
CHD3-214ENST00000572579 MICAQ29983 383 aa15.06■□□□□ 0
CHD3-214ENST00000572579 TEX30Q5JUR7 227 aa15.06■□□□□ 0
CHD3-214ENST00000572579 LCN8Q6JVE9 175 aa15.06■□□□□ 0
CHD3-214ENST00000572579 RPL13AP3Q6NVV1 102 aa15.06■□□□□ 0
CHD3-214ENST00000572579 DRAM2Q6UX65 266 aa15.06■□□□□ 0
CHD3-214ENST00000572579 LRRN1Q6UXK5 716 aa15.06■□□□□ 0
CHD3-214ENST00000572579 ZNF826PQ6ZT77 177 aa15.06■□□□□ 0
CHD3-214ENST00000572579 SPATC1Q76KD6 591 aa15.06■□□□□ 0
CHD3-214ENST00000572579 PRSS45Q7RTY3 260 aa15.06■□□□□ 0
CHD3-214ENST00000572579 MRPL21Q7Z2W9 205 aaKnown RBP15.06■□□□□ 0
CHD3-214ENST00000572579 C11orf53Q8IXP5 236 aa15.06■□□□□ 0
CHD3-214ENST00000572579 PARP8Q8N3A8 854 aa15.06■□□□□ 0
CHD3-214ENST00000572579 SPTSSAQ969W0 71 aa15.06■□□□□ 0
CHD3-214ENST00000572579 ERGIC1Q969X5 290 aa15.06■□□□□ 0
CHD3-214ENST00000572579 SLAMF6Q96DU3 332 aa15.06■□□□□ 0
CHD3-214ENST00000572579 AMELYQ99218 206 aa15.06■□□□□ 0
CHD3-214ENST00000572579 NUDT16L1Q9BRJ7 211 aaKnown RBP15.06■□□□□ 0
CHD3-214ENST00000572579 DGCR6LQ9BY27 220 aa15.06■□□□□ 0
CHD3-214ENST00000572579 MED20Q9H944 212 aa15.06■□□□□ 0
CHD3-214ENST00000572579 TBC1D23Q9NUY8 699 aa15.06■□□□□ 0
CHD3-214ENST00000572579 ZNF319Q9P2F9 582 aa15.06■□□□□ 0
CHD3-214ENST00000572579 C3orf80F5H4A9 247 aa15.05■□□□□ -0
CHD3-214ENST00000572579 DCTN3O75935 186 aa15.05■□□□□ -0
CHD3-214ENST00000572579 SPARCP09486 303 aa15.05■□□□□ -0
CHD3-214ENST00000572579 ENTPD1P49961 510 aa15.05■□□□□ -0
CHD3-214ENST00000572579 ELF3P78545 371 aaPredicted RBP15.05■□□□□ -0
CHD3-214ENST00000572579 MXRA7P84157 204 aa15.05■□□□□ -0
CHD3-214ENST00000572579 OR2T5Q6IEZ7 315 aa15.05■□□□□ -0
CHD3-214ENST00000572579 DCDC5Q6ZRR9 648 aa15.05■□□□□ -0
CHD3-214ENST00000572579 TMEM179BQ7Z7N9 219 aa15.05■□□□□ -0
CHD3-214ENST00000572579 WDR86Q86TI4 376 aa15.05■□□□□ -0
CHD3-214ENST00000572579 C1orf87Q8N0U7 546 aa15.05■□□□□ -0
CHD3-214ENST00000572579 LINC00471Q8N535 108 aa15.05■□□□□ -0
CHD3-214ENST00000572579 OR8B3Q8NGG8 313 aa15.05■□□□□ -0
CHD3-214ENST00000572579 OR2T29Q8NH02 315 aa15.05■□□□□ -0
CHD3-214ENST00000572579 SPSB4Q96A44 273 aa15.05■□□□□ -0
CHD3-214ENST00000572579 SGK3Q96BR1 496 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms