RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TNFRSF1AP19438 455 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 KITLGP21583 273 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 POLR2IP36954 125 aaKnown RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 MMP15P51511 669 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 ALDH3A2P51648 485 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 CHN2P52757 468 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 HCCSP53701 268 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 MVKQ03426 396 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 GABPB1Q06547 395 aaPredicted RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 GK2Q14410 553 aaPredicted RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 PCK2Q16822 640 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 TIGD6Q17RP2 521 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 RSPO1Q2MKA7 263 aaPredicted RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 NXNL2Q5VZ03 156 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 C12orf73Q69YU5 71 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 KCTD18Q6PI47 426 aaPredicted RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 LRRN1Q6UXK5 716 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 FBXW12Q6X9E4 464 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 FAM57BQ71RH2 274 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 MEPCEQ7L2J0 689 aaKnown RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 SLC16A9Q7RTY1 509 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 BCDIN3DQ7Z5W3 292 aaKnown RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 PEG10Q86TG7 708 aaKnown RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 GID4Q8IVV7 300 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 PQLC1Q8N2U9 271 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 CBR4Q8N4T8 237 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 OR8G5Q8NG78 346 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 OTOSQ8NHW6 89 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 ST7LQ8TDW4 575 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 RNF133Q8WVZ7 376 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 CCL17Q92583 94 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 ELMOD3Q96FG2 381 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 TIMD4Q96H15 378 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 PGAM5Q96HS1 289 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 CNN2Q99439 309 aaKnown RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 GABARAPL3Q9BY60 117 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 MROQ9BYG7 248 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 TTTY10Q9BZA0 68 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 YIPF3Q9GZM5 350 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 ZNF275Q9NSD4 429 aaPredicted RBP6.62□□□□□ -1.35
SMG6-211ENST00000572369 TREM2Q9NZC2 230 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 IKZF2Q9UKS7 526 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 GTF2A1LQ9UNN4 478 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 TMEM14AQ9Y6G1 99 aa6.62□□□□□ -1.35
SMG6-211ENST00000572369 TANC2Q9HCD6 1990 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 ISPDA4D126 451 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 ERICH4A6NGS2 130 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 VWC2LB2RUY7 222 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 CLDN25C9JDP6 229 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 ANKRD65E5RJM6 399 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 ZNF670-ZNF695F2Z2N8 137 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 ALPLP05186 524 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 SLC2A5P22732 501 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 GIFP27352 417 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 CRYBB2P43320 205 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 SRP9P49458 86 aaKnown RBP6.61□□□□□ -1.35
SMG6-211ENST00000572369 PRSS12P56730 875 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 TMEM33P57088 247 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
SMG6-211ENST00000572369 SLC3A1Q07837 685 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 CDK5R2Q13319 367 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 TMEM249Q2WGJ8 235 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 SNAI3Q3KNW1 292 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 TMEM255AQ5JRV8 349 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 GLYATL3Q5SZD4 288 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 AVPI1Q5T686 147 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 CYB5R2Q6BCY4 276 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 COLCA1Q6ZS62 124 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 SLC35F2Q8IXU6 374 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OR10AD1Q8NGE0 317 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OR51G2Q8NGK0 314 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OR8J1Q8NGP2 316 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OR13G1Q8NGZ3 307 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OR2AE1Q8NHA4 323 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 RAB1CQ92928 201 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 RFKQ969G6 155 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 YIPF5Q969M3 257 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 AMELYQ99218 206 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OR10A2Q9H208 303 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 OPA3Q9H6K4 179 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 YAE1D1Q9NRH1 226 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 TMEM100Q9NV29 134 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 USE1Q9NZ43 259 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 WARS2Q9UGM6 360 aaKnown RBP6.61□□□□□ -1.35
SMG6-211ENST00000572369 IL19Q9UHD0 177 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 GMPPBQ9Y5P6 360 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 DYSFO75923 2080 aa6.61□□□□□ -1.35
SMG6-211ENST00000572369 IGHV4-61A0A0C4DH41 118 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.6□□□□□ -1.35
SMG6-211ENST00000572369 LRP5LA4QPB2 252 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 CCDC182A6NF36 153 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 IQCF6A8MYZ5 107 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 H0YL77 283 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 PSMD9O00233 223 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 PHYHO14832 338 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 CD55P08174 381 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 ADH4P08319 380 aa6.6□□□□□ -1.35
SMG6-211ENST00000572369 ZNF16P17020 682 aaPredicted RBP6.6□□□□□ -1.35
SMG6-211ENST00000572369 ALOX5APP20292 161 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms