RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NIPAL1Q6NVV3 410 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 NOXRED1Q6NXP6 359 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 MED27Q6P2C8 311 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 UQCC3Q6UW78 93 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 LCTLQ6UWM7 567 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DRAM2Q6UX65 266 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 QSOX2Q6ZRP7 698 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 Q6ZSR6 202 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TTLL10Q6ZVT0 673 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CREB3L2Q70SY1 520 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 RNF144BQ7Z419 303 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CPEB2Q7Z5Q1 589 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 GALNT10Q86SR1 603 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 COMMD2Q86X83 199 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 SYT12Q8IV01 421 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 GALNT16Q8N428 558 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 LRRC18Q8N456 261 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 FAM109AQ8N4B1 249 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DEFB123Q8N688 67 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 Q8N9G6 341 aaPredicted RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 OR2M7Q8NG81 312 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 OR4E2Q8NGC2 313 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 OR52E4Q8NGH9 312 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 OR4K15Q8NH41 348 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 OR52E5Q8NH55 327 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 FLVCR1-AS1Q8TAF5 88 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 RAB2BQ8WUD1 216 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 C11orf40Q8WZ69 217 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 NR4A3Q92570 626 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 RORBQ92753 470 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TFAP2CQ92754 450 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 HIST1H2ACQ93077 130 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 YIPF6Q96EC8 236 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 WDR34Q96EX3 536 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 PELI1Q96FA3 418 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CENPNQ96H22 339 aaPredicted RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 POM121L2Q96KW2 1035 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 FCRL1Q96LA6 429 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CNBD2Q96M20 576 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TMEM56Q96MV1 263 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 WDR92Q96MX6 357 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 OR52E6Q96RD3 313 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 F2RL3Q96RI0 385 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 JMJD8Q96S16 334 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SDHCQ99643 169 aaPredicted RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 EPYCQ99645 322 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 VKORC1Q9BQB6 163 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 NDUFAF3Q9BU61 184 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TLNRD1Q9H1K6 362 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 MMP28Q9H239 520 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SEMA6AQ9H2E6 1030 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 BEX1Q9HBH7 125 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DNAJC4Q9NNZ3 241 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 LHX9Q9NQ69 397 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SPANXA1Q9NS26 97 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TMEM74BQ9NUR3 256 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 MRPS18AQ9NVS2 196 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 IMPAD1Q9NX62 359 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ASIC5Q9NY37 505 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SEC14L4Q9UDX3 406 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DKKL1Q9UK85 242 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 MRPS28Q9Y2Q9 187 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 MRPS17Q9Y2R5 130 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 KCNIP3Q9Y2W7 256 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 RNF115Q9Y4L5 304 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SNX11Q9Y5W9 270 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 PEX16Q9Y5Y5 336 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TMEM56-RWDD3S4R434 201 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 PHF3Q92576 2039 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 PCSK5Q92824 1860 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C9orf170A2RU37 121 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TMEM8BA6NDV4 472 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TRDCB7Z8K6 153 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PRSS46E5RG02 174 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 K7EP13 123 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 DCTN6O00399 190 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PLPP1O14494 284 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ARPC1BO15143 372 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 ARPC2O15144 300 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 P2RX6O15547 441 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 HCRTR1O43613 425 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TMPRSS11DO60235 418 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 HPGDSO60760 199 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 KHDRBS3O75525 346 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 AGFG2O95081 481 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 MED26O95402 600 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TSPAN13O95857 204 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C6orf47O95873 294 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CYB5R3P00387 301 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 HPRP00739 348 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 IGLV3-19P01714 112 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 KLK1P06870 262 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 KLK3P07288 261 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR8U9P0C7N5 309 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C1QTNF9P0C862 333 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 SP9P0CG40 484 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PVRP15151 417 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms