RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 SLC25A13Q9UJS0 675 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 SPTBP11277 2137 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 A0A0G2JK05 382 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 IRGMA1A4Y4 181 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 NME2P1O60361 137 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 SLC25A4P12235 298 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 MAKP20794 623 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 FPR2P25090 351 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 TMEM33P57088 247 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 RPS13P62277 151 aaKnown RBP9.74□□□□□ -0.85
CLK3-226ENST00000569406 FZD5Q13467 585 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 MMDQ15546 238 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 VWA2Q5GFL6 755 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 SOHLH1Q5JUK2 328 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 LCTLQ6UWM7 567 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 GBGT1Q8N5D6 347 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 ZNF433Q8N7K0 673 aaPredicted RBP9.74□□□□□ -0.85
CLK3-226ENST00000569406 OR4C16Q8NGL9 310 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 GLYATL1Q969I3 302 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 PINX1Q96BK5 328 aaKnown RBP9.74□□□□□ -0.85
CLK3-226ENST00000569406 DERL3Q96Q80 235 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 SGPP1Q9BX95 441 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 C1QTNF2Q9BXJ5 285 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 FKBP11Q9NYL4 201 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 C5AR2Q9P296 337 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 HSF4Q9ULV5 492 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 ANGPT4Q9Y264 503 aa9.74□□□□□ -0.85
CLK3-226ENST00000569406 MRPS18BQ9Y676 258 aaKnown RBP9.74□□□□□ -0.85
CLK3-226ENST00000569406 C5orf51A6NDU8 294 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ERAL1O75616 437 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 OR5AC1P0C628 307 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ALPPL2P10696 532 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 NPPBP16860 134 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 MANFP55145 182 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 VAMP3Q15836 100 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 MRM1Q6IN84 353 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 SLCO4C1Q6ZQN7 724 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 TMEM104Q8NE00 496 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ZNF48Q96MX3 618 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 WRAP53Q9BUR4 548 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 FGF20Q9NP95 211 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 CSAG2Q9Y5P2 127 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 A6NIZ1 184 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 CTDSPLO15194 276 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 NME6O75414 186 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 KLK1P06870 262 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 EPHX1P07099 455 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 CYC1P08574 325 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 HKR1P10072 659 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 BTN3A2P78410 334 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 YOD1Q5VVQ6 348 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 AGTRAPQ6RW13 159 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 SLC35D2Q76EJ3 337 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ERASQ7Z444 233 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 OR1J2Q8NGS2 313 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ZNF480Q8WV37 535 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 DVL3Q92997 716 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 TBX15Q96SF7 602 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 TXN2Q99757 166 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 LGR4Q9BXB1 951 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 MEGF9Q9H1U4 602 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ABRACLQ9P1F3 81 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 APOBEC3BQ9UH17 382 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 OR52A1Q9UKL2 312 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 SYT7O43581 403 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 GNG7O60262 68 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 C1orf105O95561 183 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 P2RX1P51575 399 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 SRSF5Q13243 272 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 FBLN7Q53RD9 439 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 TPTE2P1Q5T6R2 138 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 TCTN3Q6NUS6 607 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 UNQ9370/PRO34162Q6UXP9 181 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 FRRS1Q6ZNA5 592 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 FCRLAQ7L513 359 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 GRASPQ7Z6J2 395 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 OR11L1Q8NGX0 322 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ORAOV1Q8WV07 137 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 GEMIN6Q8WXD5 167 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 MCHR2Q969V1 340 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 WDR34Q96EX3 536 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 SDSLQ96GA7 329 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 IL23AQ9NPF7 189 aa9.73□□□□□ -0.85
CLK3-226ENST00000569406 ZNF701Q9NV72 531 aaPredicted RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 MRPS2Q9Y399 296 aaKnown RBP9.73□□□□□ -0.85
CLK3-226ENST00000569406 GPANK1O95872 356 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 CD8AP01732 235 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 GTF2F2P13984 249 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 MAS1LP35410 378 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 XCR1P46094 333 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 TAS2R50P59544 299 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 SELENOVP59797 346 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 ST3GAL3Q11203 375 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 EBPQ15125 230 aaKnown RBP9.72□□□□□ -0.85
CLK3-226ENST00000569406 SMIM21Q3B7S5 101 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 PRR27Q6MZM9 219 aa9.72□□□□□ -0.85
CLK3-226ENST00000569406 SHISA2Q6UWI4 295 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms