RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DUSP21Q9H596 190 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 MOB1AQ9H8S9 216 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 ERVK-18Q9QC07 812 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 DUSP13Q9UII6 198 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 STARD10Q9Y365 291 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 R4GMQ9 66 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 FN1P02751 2386 aaKnown RBP13.81□□□□□ -0.2
USB1-215ENST00000569252 E7EQL1 145 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 HS3ST1O14792 307 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 XRCC2O43543 280 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 ICMTO60725 284 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 MRPS14O60783 128 aaKnown RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 NGFP01138 241 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 RPSAP08865 295 aaKnown RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 HTR1AP08908 422 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 SLC2A1P11166 492 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 LOXP28300 417 aaPredicted RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 C21orf33P30042 268 aaPredicted RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 OTX1P32242 354 aaPredicted RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 SERPINF1P36955 418 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 MMP16P51512 607 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 GABARAPL2P60520 117 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 SLC35A2P78381 396 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 BCL2L15Q5TBC7 163 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 AGAP6Q5VW22 663 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 PRSS48Q7RTY5 328 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 COMMD2Q86X83 199 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 ZNF101Q8IZC7 436 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 RFLNBQ8N5W9 214 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 SLC25A40Q8TBP6 338 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 FOXC2Q99958 501 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 RHNO1Q9BSD3 238 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 PLK3Q9H4B4 646 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 DLL4Q9NR61 685 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 FKBP14Q9NWM8 211 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 PTTG3PQ9NZH4 202 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 ST6GALNAC2Q9UJ37 374 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 FBXO9Q9UK97 447 aaPredicted RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 OR52A1Q9UKL2 312 aa13.8□□□□□ -0.2
USB1-215ENST00000569252 NSD1Q96L73 2696 aaPredicted RBP13.8□□□□□ -0.2
USB1-215ENST00000569252 H3BSA7 217 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 OR4A8P0C604 315 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 LIMS3P0CW19 117 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 LIMS4P0CW20 117 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 SELEP16581 610 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 CHN2P52757 468 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 NKX6-1P78426 367 aaPredicted RBP13.79□□□□□ -0.2
USB1-215ENST00000569252 GFOD2Q3B7J2 385 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 SPATA46Q5T0L3 261 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 RNLSQ5VYX0 342 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 PGAP1Q75T13 922 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 MRPL21Q7Z2W9 205 aaKnown RBP13.79□□□□□ -0.2
USB1-215ENST00000569252 MUC15Q8N387 334 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 WFDC11Q8NEX6 87 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 OR52N1Q8NH53 320 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 SPRYD4Q8WW59 207 aaPredicted RBP13.79□□□□□ -0.2
USB1-215ENST00000569252 GATAD2BQ8WXI9 593 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 CDCA4Q9BXL8 241 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 OR2J1Q9GZK6 312 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 PBOV1Q9GZY1 135 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 RGCCQ9H4X1 137 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 OPA3Q9H6K4 179 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 BABAM2Q9NXR7 383 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 CLEC2DQ9UHP7 191 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 ZNF391Q9UJN7 358 aa13.79□□□□□ -0.2
USB1-215ENST00000569252 A0A1W2PPW3 197 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 B9A039 149 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 GPRIN2O60269 458 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 TNFAIP8O95379 198 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 TTKP33981 857 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 PSMB10P40306 273 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 KLF3P57682 345 aaPredicted RBP13.78□□□□□ -0.2
USB1-215ENST00000569252 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 COLCA1Q6ZS62 124 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 RFPL4BQ6ZWI9 263 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 SVOPQ8N4V2 548 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 ZNF611Q8N823 705 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 TMEM171Q8WVE6 324 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 RORBQ92753 470 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 CMBLQ96DG6 245 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 ISG20L2Q9H9L3 353 aaKnown RBP13.78□□□□□ -0.2
USB1-215ENST00000569252 TRIM36Q9NQ86 728 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 ACOXLQ9NUZ1 547 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 FZR1Q9UM11 496 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
USB1-215ENST00000569252 HEATR1Q9H583 2144 aaKnown RBP13.78□□□□□ -0.2
USB1-215ENST00000569252 PLSCR5A0PG75 271 aa13.77□□□□□ -0.21
USB1-215ENST00000569252 GGT3PA6NGU5 568 aa13.77□□□□□ -0.21
USB1-215ENST00000569252 PRR32B1ATL7 298 aa13.77□□□□□ -0.21
USB1-215ENST00000569252 MTRF1O75570 445 aaKnown RBP13.77□□□□□ -0.21
USB1-215ENST00000569252 RAC2P15153 192 aa13.77□□□□□ -0.21
USB1-215ENST00000569252 EVX1P49640 407 aa13.77□□□□□ -0.21
USB1-215ENST00000569252 WNT4P56705 351 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms