RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SNAI3Q3KNW1 292 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 ZBED5Q49AG3 693 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 SAMD5Q5TGI4 173 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 TSEN54Q7Z6J9 526 aaKnown RBP12.22□□□□□ -0.45
USB1-214ENST00000568848 LDLRAD3Q86YD5 345 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 FAM90A1Q86YD7 464 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 SLC15A3Q8IY34 581 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 OFCC1Q8IZS5 231 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 OR2T12Q8NG77 320 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 Q8TCH9 128 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 C17orf50Q8WW18 174 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 ADAT1Q9BUB4 502 aaKnown RBP12.22□□□□□ -0.45
USB1-214ENST00000568848 TRIM15Q9C019 465 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 POLR2J2Q9GZM3 115 aaKnown RBP12.22□□□□□ -0.45
USB1-214ENST00000568848 POLR2J3Q9H1A7 115 aaKnown RBP12.22□□□□□ -0.45
USB1-214ENST00000568848 ERVK-18Q9QC07 812 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 ZNF281Q9Y2X9 895 aa12.22□□□□□ -0.45
USB1-214ENST00000568848 A0A1B0GWJ7 208 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 PIN1P1O15428 100 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 CCDC22O60826 627 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 PPP1R3DO95685 299 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 LCATP04180 440 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 GRPP07492 148 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 TUBG1P23258 451 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 GATA4P43694 442 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 GYS2P54840 703 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 GMFBP60983 142 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 HIST1H3AP68431 136 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 TRAM2Q15035 370 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 OXLD1Q5BKU9 147 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 HIST2H3PS2Q5TEC6 136 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 MBOAT2Q6ZWT7 520 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 HIST2H3AQ71DI3 136 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 OR5L1Q8NGL2 311 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 PPP1R35Q8TAP8 253 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 COQ7Q99807 217 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 HCAR1Q9BXC0 346 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 FAM107BQ9H098 131 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 PPA2Q9H2U2 334 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 SRA1Q9HD15 236 aaKnown RBP12.21□□□□□ -0.45
USB1-214ENST00000568848 TUBG2Q9NRH3 451 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.45
USB1-214ENST00000568848 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.46
USB1-214ENST00000568848 IGLV1-36A0A0B4J1U3 117 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 NME4O00746 187 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 ZNF682O95780 498 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 RGS6P49758 472 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 LSM6P62312 80 aaKnown RBP12.2□□□□□ -0.46
USB1-214ENST00000568848 SELENOWP63302 87 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 LIPEQ05469 1076 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 LY6EQ16553 131 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 KRTAP27-1Q3LI81 207 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 LYPD4Q6UWN0 246 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 WDR86Q86TI4 376 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 SPRYD4Q8WW59 207 aaPredicted RBP12.2□□□□□ -0.46
USB1-214ENST00000568848 ACOT11Q8WXI4 607 aaPredicted RBP12.2□□□□□ -0.46
USB1-214ENST00000568848 COG8Q96MW5 612 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 CCL13Q99616 98 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 C16orf95Q9H693 158 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 NMNAT1Q9HAN9 279 aaPredicted RBP12.2□□□□□ -0.46
USB1-214ENST00000568848 PNRC2Q9NPJ4 139 aaKnown RBP12.2□□□□□ -0.46
USB1-214ENST00000568848 KIF17Q9P2E2 1029 aa12.2□□□□□ -0.46
USB1-214ENST00000568848 hCG_1807616A0A1W2PRN6 198 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 A6NLC8 198 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 RNASEK-C17orf49H0YIS7 233 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 PTP4A3O75365 173 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 DIRAS1O95057 198 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 IFNA14P01570 189 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 SLC2A1P11166 492 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 SDHAP31040 664 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 SLC7A2P52569 658 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 BPIFB3P59826 476 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 CSNK2BP67870 215 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 ZNF92Q03936 586 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 TRAP1Q12931 704 aaKnown RBP12.19□□□□□ -0.46
USB1-214ENST00000568848 SEC23BQ15437 767 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 GLYATL3Q5SZD4 288 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 SLC18B1Q6NT16 456 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 TMPRSS11FQ6ZWK6 438 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 OR6V1Q8N148 313 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 MRAPQ8TCY5 172 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 RORBQ92753 470 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 MAP6Q96JE9 813 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 PITX2Q99697 317 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 MYLK2Q9H1R3 596 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 FN3KRPQ9HA64 309 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 EFCAB1Q9HAE3 211 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 ZNRD1Q9P1U0 126 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 VPREB3Q9UKI3 123 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 SIGLEC7Q9Y286 467 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms