RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 KAAG1Q9UBP8 84 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 IER3IP1Q9Y5U9 82 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 IGLV1-36A0A0B4J1U3 117 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 A0A0U1RQK1 487 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 HMGB1P1B2RPK0 211 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 F5H5K5 113 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 TSPAN9O75954 239 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 ZNF682O95780 498 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 LCATP04180 440 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 FBP1P09467 338 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 TGFBR2P37173 567 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 CDKN2AP42771 156 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 KLF10Q13118 480 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 CDONQ4KMG0 1287 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 OTPQ5XKR4 325 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 SFRP4Q6FHJ7 346 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 DHRS7BQ6IAN0 325 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC18B1Q6NT16 456 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 PTCHD4Q6ZW05 846 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 C19orf18Q8NEA5 215 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 RSRC1Q96IZ7 334 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 ADAT1Q9BUB4 502 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 CNTD2Q9H8S5 307 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 MRPL15Q9P015 296 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 KCNG2Q9UJ96 466 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 B9D1Q9UPM9 204 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 ENPP4Q9Y6X5 453 aa13.01□□□□□ -0.33
HERPUD1-215ENST00000568676 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13□□□□□ -0.33
HERPUD1-215ENST00000568676 CD300LBA8K4G0 201 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 C3orf80F5H4A9 247 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 GPR37O15354 613 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 TSPAN15O95858 294 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 RENP00797 406 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 H1F0P07305 194 aaKnown RBP13□□□□□ -0.33
HERPUD1-215ENST00000568676 CSF1P09603 554 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 CA6P23280 308 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 OMPP47874 163 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 ARF6P62330 175 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 GUCA2AQ02747 115 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 MEP1BQ16820 701 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 SMARCD3Q6STE5 483 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 Q6ZSV7 163 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 TSEN54Q7Z6J9 526 aaKnown RBP13□□□□□ -0.33
HERPUD1-215ENST00000568676 SPTSSAQ969W0 71 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 TMEM120AQ9BXJ8 343 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 OPA3Q9H6K4 179 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 SMURF1Q9HCE7 757 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 C14orf119Q9NWQ9 140 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 CYB5R1Q9UHQ9 305 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
HERPUD1-215ENST00000568676 FAM32AQ9Y421 112 aaKnown RBP13□□□□□ -0.33
HERPUD1-215ENST00000568676 M0R135 149 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 DCTN6O00399 190 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 CXCR6O00574 342 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 DVL1O14640 695 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 ARPC3O15145 178 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC22A2O15244 555 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 GGT2P36268 569 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 TEX36Q5VZQ5 186 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 C11orf88Q6PI97 169 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 CFAP77Q6ZQR2 320 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 HDXQ7Z353 690 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 REC114Q7Z4M0 266 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 CMTM4Q8IZR5 234 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 OR6V1Q8N148 313 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 OR5R1Q8NH85 324 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 ZNF799Q96GE5 643 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 HSH2DQ96JZ2 352 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 TSSK2Q96PF2 358 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 SAR1AQ9NR31 198 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 ZNRD1Q9P1U0 126 aa12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 RPUSD1Q9UJJ7 312 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-215ENST00000568676 LOC100653049A0A140TA62 436 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 GGT3PA6NGU5 568 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 NDUFAB1O14561 156 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 GSTA4O15217 222 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 KRT34O76011 436 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 LHBP01229 141 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 TROVE2P10155 538 aaKnown RBP eCLIP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 MUC1P15941 1255 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 RHCEP18577 417 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 GRK5P34947 590 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 FXYD6P3P58550 94 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 VMO1Q7Z5L0 202 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 C1QL4Q86Z23 238 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 BOLLQ8N9W6 283 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 OR4C15Q8NGM1 316 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 FAM110DQ8TAY7 271 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 ERMAPQ96PL5 475 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms