RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	ZMAT1	Q5H9K5	638 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RNLS	Q5VYX0	342 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FBXW12	Q6X9E4	464 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	COMMD2	Q86X83	199 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	OR52N1	Q8NH53	320 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	HAVCR1	Q96D42	359 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SIGLEC11	Q96RL6	698 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SYT3	Q9BQG1	590 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RHNO1	Q9BSD3	238 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MND1	Q9BWT6	205 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CCDC90B	Q9GZT6	254 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PBOV1	Q9GZY1	135 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DUSP21	Q9H596	190 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CXorf56	Q9H5V9	222 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CYSLTR2	Q9NS75	346 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ACOXL	Q9NUZ1	547 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FAM206A	Q9NX38	181 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	UBAP1	Q9NZ09	502 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	NUFIP1	Q9UHK0	495 aa	Known RBP	12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	OR52A1	Q9UKL2	312 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FZR1	Q9UM11	496 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LAMP3	Q9UQV4	416 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LRCH1	Q9Y2L9	728 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CAD	P27708	2225 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499		A0A0U1RQV5	110 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TMEM129	A0AVI4	362 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GGT3P	A6NGU5	568 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MRPS14	O60783	128 aa	Known RBP	12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	IGHV3-13	P01766	116 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RAF1	P04049	648 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DNASE1	P24855	282 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	C21orf33	P30042	268 aa	Predicted RBP	12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GABARAPL2	P60520	117 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GFOD2	Q3B7J2	385 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GLYATL3	Q5SZD4	288 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PAMR1	Q6UXH9	720 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PRSS45	Q7RTY3	260 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PRSS48	Q7RTY5	328 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DTX2	Q86UW9	622 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FTMT	Q8N4E7	242 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	REEP6	Q96HR9	211 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CDCA4	Q9BXL8	241 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MRPL37	Q9BZE1	423 aa	Known RBP	12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MS4A5	Q9H3V2	200 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DYNLRB1	Q9NP97	96 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TAAR3P	Q9P1P4	343 aa		12.79	□□□□□ -0.36
KLHDC4-223	ENST00000568499	IGLV3-9	A0A075B6K5	115 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499		M0R233	179 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MTRF1	O75570	445 aa	Known RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SOD3	P08294	240 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DANCR	P0C864	163 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	KITLG	P21583	273 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DDOST	P39656	456 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TAS2R43	P59537	309 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PSG7	Q13046	419 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GK2	Q14410	553 aa	Predicted RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	HLX	Q14774	488 aa	Predicted RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CCDC58	Q4VC31	144 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FDX2	Q6P4F2	183 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ELMOD2	Q8IZ81	293 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	OR8B12	Q8NGG6	310 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RORB	Q92753	470 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SGK3	Q96BR1	496 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PELI1	Q96FA3	418 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LURAP1	Q96LR2	239 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	REPIN1	Q9BWE0	567 aa	Known RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ISG20L2	Q9H9L3	353 aa	Known RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TRIM36	Q9NQ86	728 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	BABAM2	Q9NXR7	383 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ERVK-18	Q9QC07	812 aa		12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PURG	Q9UJV8	347 aa	Known RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	NOP16	Q9Y3C1	178 aa	Known RBP	12.78	□□□□□ -0.36
KLHDC4-223	ENST00000568499	UBC	P0CG48	685 aa	Known RBP	12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	ATP6V1B1	P15313	513 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	ZNF12	P17014	697 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	MPV17	P39210	176 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	PSMB10	P40306	273 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	TGM4	P49221	684 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	CCR9	P51686	369 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	WNT4	P56705	351 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	MVK	Q03426	396 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	ZNF92	Q03936	586 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	MFGE8	Q08431	387 aa	Predicted RBP	12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	SWI5	Q1ZZU3	235 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	TMEM244	Q5VVB8	128 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	CATSPERD	Q86XM0	798 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	SVOP	Q8N4V2	548 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	NANOGP1	Q8N7R0	232 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	CCDC54	Q8NEL0	328 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	OR2G2	Q8NGZ5	317 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	OR2AE1	Q8NHA4	323 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	GATAD2B	Q8WXI9	593 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	SPSB4	Q96A44	273 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	TRMT61A	Q96FX7	289 aa	Known RBP	12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	ZNF649	Q9BS31	505 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	COMMD4	Q9H0A8	199 aa		12.77	□□□□□ -0.37
KLHDC4-223	ENST00000568499	POFUT1	Q9H488	388 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms