RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CSF1P09603 554 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 COX10Q12887 443 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 GDPGP1Q6ZNW5 385 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 VMO1Q7Z5L0 202 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 RNF113BQ8IZP6 322 aaKnown RBP12.76□□□□□ -0.37
PALB2-205ENST00000567003 CELF2-AS1Q8N7Q2 184 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 LZICQ8WZA0 190 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 ST8SIA4Q92187 359 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 ATP6V1G3Q96LB4 118 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 FN3KRPQ9HA64 309 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 NRIP3Q9NQ35 241 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 C1orf123Q9NWV4 160 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 NOTCH3Q9UM47 2321 aa12.76□□□□□ -0.37
PALB2-205ENST00000567003 IGLV1-36A0A0B4J1U3 117 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 ZNF816-ZNF321PA0A0X1KG74 233 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 OOEPA6NGQ2 149 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 DVL1O14640 695 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 ALX3O95076 343 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 PPP1R3DO95685 299 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 TRAP1Q12931 704 aaKnown RBP12.75□□□□□ -0.37
PALB2-205ENST00000567003 GPR139Q6DWJ6 353 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 SLC18B1Q6NT16 456 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 Q6ZPA2 131 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 PGAP1Q75T13 922 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 TSEN54Q7Z6J9 526 aaKnown RBP12.75□□□□□ -0.37
PALB2-205ENST00000567003 ADCK1Q86TW2 530 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 SLC7A13Q8TCU3 470 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 RSRC1Q96IZ7 334 aaKnown RBP12.75□□□□□ -0.37
PALB2-205ENST00000567003 GPX7Q96SL4 187 aaPredicted RBP12.75□□□□□ -0.37
PALB2-205ENST00000567003 PITX2Q99697 317 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 TMEM120AQ9BXJ8 343 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 C16orf95Q9H693 158 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 SRA1Q9HD15 236 aaKnown RBP12.75□□□□□ -0.37
PALB2-205ENST00000567003 INTS9Q9NV88 658 aaKnown RBP12.75□□□□□ -0.37
PALB2-205ENST00000567003 CMTM6Q9NX76 183 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
PALB2-205ENST00000567003 DNAH9Q9NYC9 4486 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 CD300LBA8K4G0 201 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 EDF1O60869 148 aaKnown RBP12.74□□□□□ -0.37
PALB2-205ENST00000567003 GRPP07492 148 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 MDH1P40925 334 aaKnown RBP12.74□□□□□ -0.37
PALB2-205ENST00000567003 MALLQ13021 153 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 KLF10Q13118 480 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 KLRD1Q13241 179 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 KCNJ8Q15842 424 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 IFI44LQ53G44 452 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 MRPL21Q7Z2W9 205 aaKnown RBP12.74□□□□□ -0.37
PALB2-205ENST00000567003 OR6V1Q8N148 313 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 PNKDQ8N490 385 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 SLC26A10Q8NG04 563 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 HSH2DQ96JZ2 352 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 ATF6BQ99941 703 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 DPAGT1Q9H3H5 408 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 FN3KQ9H479 309 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
PALB2-205ENST00000567003 SIRT7Q9NRC8 400 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 ADA2Q9NZK5 511 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 ZNRD1Q9P1U0 126 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 B9D1Q9UPM9 204 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 TMEM5Q9Y2B1 443 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 SIGLEC9Q9Y336 463 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 RYR3Q15413 4870 aa12.74□□□□□ -0.37
PALB2-205ENST00000567003 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 LOC100653049A0A140TA62 436 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 A6NLC8 198 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 KRT34O76011 436 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 OMPP47874 163 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 ZNF92Q03936 586 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 SEC23BQ15437 767 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 COQ5Q5HYK3 327 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 FGD3Q5JSP0 725 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 RRM2BQ7LG56 351 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 LNX2Q8N448 690 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 GCSAMQ8N6F7 178 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 C11orf44Q8N8P7 122 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
PALB2-205ENST00000567003 VPREB3Q9UKI3 123 aa12.73□□□□□ -0.37
PALB2-205ENST00000567003 UNC119BA6NIH7 251 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 BBIP1A8MTZ0 92 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 CXCR6O00574 342 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 TSPAN9O75954 239 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 PTBP3O95758 552 aaKnown RBP12.72□□□□□ -0.37
PALB2-205ENST00000567003 TXNDC12O95881 172 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 SERPINA1P01009 418 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 CRABP1P29762 137 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 GGT2P36268 569 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 RPS27P42677 84 aaKnown RBP12.72□□□□□ -0.37
PALB2-205ENST00000567003 RPS6KA3P51812 740 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 FAM189A2Q15884 450 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 CDONQ4KMG0 1287 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 SAMD5Q5TGI4 173 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 PGM2L1Q6PCE3 622 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms