RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 PRR31Q5SQ13 230 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 FAM201AQ5SY85 155 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 WDR25Q64LD2 544 aaPredicted RBP15.62■□□□□ 0.09
CLN3-218ENST00000565688 CPLX4Q7Z7G2 160 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 ZDHHC21Q8IVQ6 265 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 PROKR2Q8NFJ6 384 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 OR4C15Q8NGM1 316 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 CDRT15Q96T59 188 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 ZNF696Q9H7X3 374 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 NDE1Q9NXR1 346 aa15.62■□□□□ 0.09
CLN3-218ENST00000565688 IGHV3OR16-10A0A075B7F0 116 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 TRAV40A0A0B4J280 105 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 POM121CA8CG34 1229 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 ENSAO43768 121 aaKnown RBP15.61■□□□□ 0.09
CLN3-218ENST00000565688 CA6P23280 308 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 MSX2P35548 267 aaPredicted RBP15.61■□□□□ 0.09
CLN3-218ENST00000565688 PSMB10P40306 273 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 HMGA2P52926 109 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 CD276Q5ZPR3 534 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 DRAM2Q6UX65 266 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 FITM2Q8N6M3 262 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 DDOQ99489 341 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 ADAT1Q9BUB4 502 aaKnown RBP15.61■□□□□ 0.09
CLN3-218ENST00000565688 EGLN3Q9H6Z9 239 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 TRIM36Q9NQ86 728 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 UFSP2Q9NUQ7 469 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 IL20Q9NYY1 176 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 MRPL15Q9P015 296 aaKnown RBP15.61■□□□□ 0.09
CLN3-218ENST00000565688 RNF7Q9UBF6 113 aa15.61■□□□□ 0.09
CLN3-218ENST00000565688 DOCK11Q5JSL3 2073 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 GGT3PA6NGU5 568 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 BHLHE40O14503 412 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 PTBP3O95758 552 aaKnown RBP15.6■□□□□ 0.09
CLN3-218ENST00000565688 OTX1P32242 354 aaPredicted RBP15.6■□□□□ 0.09
CLN3-218ENST00000565688 PYCR1P32322 319 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 ZNF92Q03936 586 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 MPPED2Q15777 294 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 PRAMEF6Q5VXH4 476 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 C16orf89Q6UX73 402 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 LYPD2Q6UXB3 125 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 ZNF841Q6ZN19 808 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 SPERTQ8NA61 448 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 CYB561A3Q8NBI2 242 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 OR10S1Q8NGN2 331 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 TRIM15Q9C019 465 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 OPA3Q9H6K4 179 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 UNKLQ9H9P5 680 aaKnown RBP15.6■□□□□ 0.09
CLN3-218ENST00000565688 KIF17Q9P2E2 1029 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 ERVK-18Q9QC07 812 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 TAGLN3Q9UI15 199 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 LYVE1Q9Y5Y7 322 aa15.6■□□□□ 0.09
CLN3-218ENST00000565688 ATP8B1O43520 1251 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 NDUFA2O43678 99 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 LIPFP07098 398 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 MZT1Q08AG7 82 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 SNAI3Q3KNW1 292 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 GPR157Q5UAW9 335 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 RASSF6Q6ZTQ3 369 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 COPS4Q9BT78 406 aa15.59■□□□□ 0.09
CLN3-218ENST00000565688 MMADHCQ9H3L0 296 aaPredicted RBP15.59■□□□□ 0.09
CLN3-218ENST00000565688 TRAV38-1A0A0B4J264 116 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.58■□□□□ 0.08
CLN3-218ENST00000565688 TVP23AA6NH52 213 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 LGALS8O00214 317 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 TNFRSF11BO00300 401 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 FMO3P31513 532 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 RPS27P42677 84 aaKnown RBP15.58■□□□□ 0.08
CLN3-218ENST00000565688 FGF12P61328 243 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 TAF13Q15543 124 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 GLYATL3Q5SZD4 288 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 C16orf87Q6PH81 154 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 DCXRQ7Z4W1 244 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 DEFB107AQ8IZN7 70 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 LNX2Q8N448 690 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 C19orf18Q8NEA5 215 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 OR9Q2Q8NGE9 314 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 OR2AE1Q8NHA4 323 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 ZDHHC16Q969W1 377 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 TECTBQ96PL2 329 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 BTBD10Q9BSF8 475 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 PRDM13Q9H4Q3 707 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 BAIAP2Q9UQB8 552 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 COMMD3-BMI1R4GMX3 469 aa15.58■□□□□ 0.08
CLN3-218ENST00000565688 C22orf46C9J442 243 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 ENTPD1P49961 510 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 MXRA7P84157 204 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 OR8B8Q15620 311 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 PCK2Q16822 640 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 TEX30Q5JUR7 227 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 ZNF362Q5T0B9 420 aaPredicted RBP15.57■□□□□ 0.08
CLN3-218ENST00000565688 ZNF770Q6IQ21 691 aaPredicted RBP15.57■□□□□ 0.08
CLN3-218ENST00000565688 BRD3OSQ6XYD6 125 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 SLC37A3Q8NCC5 494 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 OR51L1Q8NGJ5 315 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 SLAMF6Q96DU3 332 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 KCNJ15Q99712 375 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 NOX4Q9NPH5 578 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 TBC1D23Q9NUY8 699 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 ARL8BQ9NVJ2 186 aa15.57■□□□□ 0.08
CLN3-218ENST00000565688 C14orf119Q9NWQ9 140 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms