RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FBXL3Q9UKT7 428 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 PADI1Q9ULC6 663 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 DMDP11532 3685 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 GGT3PA6NGU5 568 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 CTAG2O75638 210 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 CBR3O75828 277 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 TGM6O95932 706 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 AMY1AP04745 511 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF17P17021 662 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 HTR2CP28335 458 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 DNASE1L1P49184 302 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 POU3F4P49335 361 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 SSPNQ14714 243 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ANGPT1Q15389 498 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 C1orf100Q5SVJ3 147 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ASPHD2Q6ICH7 369 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 MEX3BQ6ZN04 569 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 MDGA2Q7Z553 956 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ELMOD2Q8IZ81 293 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ASCC1Q8N9N2 400 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 OR13C3Q8NGS6 347 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 OR2AJ1Q8NGZ0 328 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ZFAND1Q8TCF1 268 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC25A28Q96A46 364 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 LOXL4Q96JB6 756 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 UTP23Q9BRU9 249 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 NAA11Q9BSU3 229 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 OR51J1Q9H342 316 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 RANBP3Q9H6Z4 567 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 PROK2Q9HC23 129 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 CENPMQ9NSP4 180 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM206AQ9NX38 181 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 PAQR5Q9NXK6 330 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ING4Q9UNL4 249 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 RCE1Q9Y256 329 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 POMT1Q9Y6A1 747 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 EML6Q6ZMW3 1958 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 TECTAO75443 2155 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A1B0GVI7 797 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 LOC107986453A0A1B0GWG9 222 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A18PA6NE21 464 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A16PA6NEW6 464 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A9PA6NNJ1 464 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ADARB2-AS1A8MUL3 147 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A5PA8MXJ8 464 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF878C9JN71 531 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 H0YC42 278 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 RAB27BO00194 218 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 MT-ND4P03905 459 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A15PP0C7V4 464 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A14PP0C7W9 464 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 LIFP15018 202 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 CPT2P23786 658 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 GUCA1AP43080 201 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 CCR6P51684 374 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF133P52736 654 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 LSM6P62312 80 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 CSNK2A1P68400 391 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 RNASE12Q5GAN4 147 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 STPG1Q5TH74 334 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 PRAMEF20Q5VT98 475 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 METTL11BQ5VVY1 283 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 GPAT4Q86UL3 456 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 WDFY1Q8IWB7 410 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 INTS12Q96CB8 462 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 SORCS2Q96PQ0 1159 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM246Q9BRR3 403 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 BEX2Q9BXY8 128 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 STRADBQ9C0K7 418 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 SLCO5A1Q9H2Y9 848 aa6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 GSX1Q9H4S2 264 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 MRPL15Q9P015 296 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF107Q9UII5 783 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A1B0GUH1 482 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 CIB4A0PJX0 185 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 GJE1A6NN92 205 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 ZIC3O60481 467 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 GMDSO60547 372 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 SNAPC5O75971 98 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 STK17BO94768 372 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 WNT11O96014 354 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 TTRP02766 147 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 IL5P05113 134 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 ACSM4P0C7M7 580 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 GSTT2P0CG29 244 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 CCL3P10147 92 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 ANXA3P12429 323 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 GABRA1P14867 456 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 RAB6AP20340 208 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 S100A1P23297 94 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 HSD11B1P28845 292 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 PRSS3P35030 304 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 SFTPDP35247 375 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 RPS15P62841 145 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 RIPPLY1Q0D2K3 151 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 FCN2Q15485 313 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 GLYATL3Q5SZD4 288 aa6.41□□□□□ -1.38
HERPUD1-209ENST00000564678 OTPQ5XKR4 325 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms