RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LANCL1O43813 399 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 EIF1BO60739 113 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 NIPSNAP2O75323 286 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CSO75390 466 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 VPS26AO75436 327 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 WBP4O75554 376 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 DHFRP00374 187 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 APOC2P02655 101 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OPN1MWP04001 364 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 RLN2P04090 185 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CSF2P04141 144 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 S100A8P05109 93 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 ACSM4P0C7M7 580 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OR56A5P0C7T3 313 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUX4L2P0CJ85 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUX4L3P0CJ86 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUX4L5P0CJ88 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUX4L6P0CJ89 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUX4L7P0CJ90 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OPN1MW2P0DN77 364 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OPN1MW3P0DN78 364 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TNNI1P19237 187 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TPSB2P20231 275 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OGNP20774 298 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 GPX3P22352 226 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 WARSP23381 471 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 GADD45AP24522 165 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PSMA2P25787 234 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DPP4P27487 766 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 HTR1EP28566 365 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PTPN6P29350 595 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SDC4P31431 198 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 FMO3P31513 532 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PRDX2P32119 198 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CA5AP35218 305 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TGFBR1P36897 503 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TGFBR2P37173 567 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 EIF1P41567 113 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 CCR2P41597 374 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 P2RY4P51582 365 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 ARFIP1P53367 373 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 ERVK-25P63136 954 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 LIPEQ05469 1076 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 STX4Q12846 297 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 EXOSC2Q13868 293 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 TPSAB1Q15661 275 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 ZBTB6Q15916 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SSX2Q16385 188 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PTPN20Q4JDL3 420 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 C2orf83Q53S99 150 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PYDC2Q56P42 97 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PABPC1L2AQ5JQF8 200 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TEX30Q5JUR7 227 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CDKL4Q5MAI5 379 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SPATA46Q5T0L3 261 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 LRRC66Q68CR7 880 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 RTL6Q6ICC9 239 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 IFNEQ86WN2 208 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PHF13Q86YI8 300 aaPredicted RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 MISPQ8IVT2 679 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 RIMKLAQ8IXN7 391 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CYP4Z2PQ8N1L4 340 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 UBE2J2Q8N2K1 259 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 GVQW1Q8N7I0 195 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OR1M1Q8NGA1 313 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 OR5K1Q8NHB7 308 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 WDR36Q8NI36 951 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 ASZ1Q8WWH4 475 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SMPDL3AQ92484 453 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TCEAL3Q969E4 200 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 MRPL48Q96GC5 212 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 SMARCD1Q96GM5 515 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 RAB40CQ96S21 281 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SDHCQ99643 169 aaPredicted RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 ZNF251Q9BRH9 671 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TBCDQ9BTW9 1192 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 NDUFAF3Q9BU61 184 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 MED18Q9BUE0 208 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PINK1Q9BXM7 581 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 ERVK-6Q9BXR3 956 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 MRPL13Q9BYD1 178 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 PLA2G2FQ9BZM2 168 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 POLR1EQ9GZS1 481 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 DNTTIP1Q9H147 329 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 MED28Q9H204 178 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PIGUQ9H490 435 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUSP21Q9H596 190 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 FOLH1BQ9HBA9 442 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 NIT2Q9NQR4 276 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 ABCC13Q9NSE7 274 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 MED9Q9NWA0 146 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 LYARQ9NX58 379 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 CMTM6Q9NX76 183 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 THUMPD1Q9NXG2 353 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 LHX3Q9UBR4 397 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 DUX4Q9UBX2 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CYTH4Q9UIA0 394 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 LAMP5Q9UJQ1 280 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PURGQ9UJV8 347 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 C3orf18Q9UK00 162 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms