RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SMARCD3Q6STE5 483 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 MRPL21Q7Z2W9 205 aaKnown RBP11.67□□□□□ -0.54
CDR2-204ENST00000564542 LDLRAD3Q86YD5 345 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 LINC00346Q8IVM7 164 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 OR6V1Q8N148 313 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 PLPP7Q8NBV4 271 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 SLCO4A1Q96BD0 722 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 ADAT1Q9BUB4 502 aaKnown RBP11.67□□□□□ -0.54
CDR2-204ENST00000564542 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 SMURF1Q9HCE7 757 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
CDR2-204ENST00000564542 AURKCQ9UQB9 309 aa11.67□□□□□ -0.54
CDR2-204ENST00000564542 TRAV38-1A0A0B4J264 116 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 OOEPA6NGQ2 149 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 NME4O00746 187 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 SLC22A2O15244 555 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 ADAM20O43506 726 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 NDUFA2O43678 99 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 IGHV4-59P01825 116 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 CA6P23280 308 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 IER3P46695 156 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 PROK1P58294 105 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 SEC23BQ15437 767 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 OR8B8Q15620 311 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 TAF9Q16594 264 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 C11orf91Q3C1V1 193 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 SLC36A3Q495N2 470 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 CGB2Q6NT52 195 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 NAA40Q86UY6 237 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 OR2AJ1Q8NGZ0 328 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 FANK1Q8TC84 345 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 LHX4Q969G2 390 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 FAM162AQ96A26 154 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 ERMAPQ96PL5 475 aaPredicted RBP11.66□□□□□ -0.54
CDR2-204ENST00000564542 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 CYB5R1Q9UHQ9 305 aa11.66□□□□□ -0.54
CDR2-204ENST00000564542 FAM32AQ9Y421 112 aaKnown RBP11.66□□□□□ -0.54
CDR2-204ENST00000564542 TRBV4-1A0A0J9YWV2 114 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 A0A0U1RQK1 487 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 SLC22A31A6NKX4 558 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 CD300LBA8K4G0 201 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 M0R135 149 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 ARPC3O15145 178 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 GMDSO60547 372 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 RENP00797 406 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 RHCEP18577 417 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 GGT2P36268 569 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 GSK3BP49841 420 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 SLC7A2P52569 658 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 TPTEP56180 551 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 ZBTB46Q86UZ6 589 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 BOLLQ8N9W6 283 aaKnown RBP11.65□□□□□ -0.54
CDR2-204ENST00000564542 SCCPDHQ8NBX0 429 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 RP9Q8TA86 221 aaKnown RBP11.65□□□□□ -0.54
CDR2-204ENST00000564542 ZNF799Q96GE5 643 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 SRA1Q9HD15 236 aaKnown RBP11.65□□□□□ -0.54
CDR2-204ENST00000564542 RPRD1BQ9NQG5 326 aaKnown RBP11.65□□□□□ -0.54
CDR2-204ENST00000564542 FGFR1OP2Q9NVK5 253 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 MRPL15Q9P015 296 aaKnown RBP11.65□□□□□ -0.54
CDR2-204ENST00000564542 NDUFAF4Q9P032 175 aa11.65□□□□□ -0.54
CDR2-204ENST00000564542 TSPAN15O95858 294 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 ECDO95905 644 aaPredicted RBP11.64□□□□□ -0.55
CDR2-204ENST00000564542 SLC6A6P31641 620 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 ZNF92Q03936 586 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
CDR2-204ENST00000564542 SF3A3Q12874 501 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDR2-204ENST00000564542 RFX4Q33E94 735 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 SNAI3Q3KNW1 292 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 C8orf82Q6P1X6 216 aaPredicted RBP11.64□□□□□ -0.55
CDR2-204ENST00000564542 GDPGP1Q6ZNW5 385 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 HDXQ7Z353 690 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 FAM90A1Q86YD7 464 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 OR4K13Q8NH42 304 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 LRTOMTQ8WZ04 291 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 SPTSSAQ969W0 71 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 MAP6Q96JE9 813 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 DHRS1Q96LJ7 313 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 HOPXQ9BPY8 73 aaPredicted RBP11.64□□□□□ -0.55
CDR2-204ENST00000564542 FUZQ9BT04 418 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 OR52D1Q9H346 318 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 DPAGT1Q9H3H5 408 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 VIPAS39Q9H9C1 493 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 TCF7L1Q9HCS4 588 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 KCNG2Q9UJ96 466 aa11.64□□□□□ -0.55
CDR2-204ENST00000564542 DVL1O14640 695 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 OR10H3O60404 316 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 FCN3O75636 299 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 HLA-DQA2P01906 255 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 GYPAP02724 150 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 NCK1P16333 377 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 HIST1H1CP16403 213 aaKnown RBP11.63□□□□□ -0.55
CDR2-204ENST00000564542 ARF6P62330 175 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 CDONQ4KMG0 1287 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 Q6ZSV7 163 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 BTN2A1Q7KYR7 527 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 GCSAMQ8N6F7 178 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 SPERTQ8NA61 448 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms