RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 RAB1BQ9H0U4 201 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 PIGUQ9H490 435 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 CSNK1G1Q9HCP0 422 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 HMG20AQ9NP66 347 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 ACP6Q9NPH0 428 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 AGPAT4Q9NRZ5 378 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 HRASLS2Q9NWW9 162 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 CHMP5Q9NZZ3 219 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 UXTQ9UBK9 157 aaPredicted RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 ZNF229Q9UJW7 825 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 FLVCR2Q9UPI3 526 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 PSG8Q9UQ74 426 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 YARS2Q9Y2Z4 477 aaKnown RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 AKNAQ7Z591 1439 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 TRAV6A0A075B6T7 132 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 IGHV3-74A0A0B4J1X5 117 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 A0A1B0GW55 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ERICH2A1L162 156 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ZNF726A6NNF4 738 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 PDZK1P1A8MUH7 402 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 SCAMP2O15127 329 aaKnown RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 MRPS12O15235 138 aaKnown RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 CLDN11O75508 207 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 SLC25A14O95258 325 aaPredicted RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 FARS2O95363 451 aaKnown RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 ETHE1O95571 254 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 FABP3P05413 133 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 BCHEP06276 602 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 KRT16P08779 473 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ACSM4P0C7M7 580 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DUX4L2P0CJ85 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DUX4L3P0CJ86 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DUX4L5P0CJ88 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DUX4L6P0CJ89 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DUX4L7P0CJ90 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 OR1E1P30953 314 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 TNFSF9P41273 254 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 GPR1P46091 355 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 PSMC5P62195 406 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ACTG2P63267 376 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ZNF33AQ06730 810 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 GINS1Q14691 196 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 TRAM2Q15035 370 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 C18orf21Q32NC0 220 aaPredicted RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 LINC00336Q6ZUF6 198 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 CMC1Q7Z7K0 106 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ARHGAP18Q8N392 663 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 PRELID2Q8N945 189 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 HSD17B11Q8NBQ5 300 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 OR5K2Q8NHB8 316 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 NUBPLQ8TB37 319 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ZNF502Q8TBZ5 544 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ISOC2Q96AB3 205 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 APH1AQ96BI3 265 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 TM4SF18Q96CE8 201 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ECHDC3Q96DC8 303 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 L3HYPDHQ96EM0 354 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 OR5B12Q96R08 314 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 BBS2Q9BXC9 721 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ZYG11BQ9C0D3 744 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 ZNF302Q9NR11 478 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 CCDC59Q9P031 241 aaKnown RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 IFNKQ9P0W0 207 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DUX4Q9UBX2 424 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 DDX19BQ9UMR2 479 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 POFUT2Q9Y2G5 429 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 RCL1Q9Y2P8 373 aaKnown RBP2.18□□□□□ -2.06
UBR1-205ENST00000564540 C15orf41Q9Y2V0 281 aa2.18□□□□□ -2.06
UBR1-205ENST00000564540 GOLGA8QA0A0J9YX86 632 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 GLYATL1P3A0A0U1RQE8 302 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 SLC22A20A6NK97 555 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 HIDE1A8MVS5 230 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 SLC9A3R1O14745 358 aaPredicted RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 MGRN1O60291 552 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 SLC19A2O60779 497 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 E2F6O75461 281 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 HSBP1O75506 76 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 YEATS4O95619 227 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 KLK1P06870 262 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 HOXB8P17481 243 aaPredicted RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 AK4P27144 223 aaPredicted RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 CD34P28906 385 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 HTR2BP41595 481 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 CSNK1A1P48729 337 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 MEF2BQ02080 365 aaPredicted RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 ZNF816Q0VGE8 651 aaPredicted RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 CDC20Q12834 499 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 ART3Q13508 389 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 PGGHGQ32M88 737 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 TRMT5Q32P41 509 aaKnown RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 PID1Q7Z2X4 250 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 ERO1BQ86YB8 467 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 FAM9CQ8IZT9 166 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 NECAP1Q8NC96 275 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 OR4D6Q8NGJ1 314 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 CLHC1Q8NHS4 586 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 ANGPTL6Q8NI99 470 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 CXorf40AQ8TE69 158 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 PDCD6IPQ8WUM4 868 aaKnown RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms