RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CDK5R1Q15078 307 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 LIPKQ5VXJ0 399 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF704Q6ZNC4 412 aaPredicted RBP14.66□□□□□ -0.06
CMTM3-208ENST00000564247 C22orf34Q6ZV56 151 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 GPR141Q7Z602 305 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 NAA40Q86UY6 237 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF676Q8N7Q3 588 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 ZFP41Q8N8Y5 198 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 OR5L1Q8NGL2 311 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 OR5AK2Q8NH90 309 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 APOBEC3DQ96AK3 386 aaPredicted RBP14.66□□□□□ -0.06
CMTM3-208ENST00000564247 C1QTNF5Q9BXJ0 243 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 OR10A2Q9H208 303 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 FRRS1LQ9P0K9 344 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 NUFIP1Q9UHK0 495 aaKnown RBP14.66□□□□□ -0.06
CMTM3-208ENST00000564247 ST6GALNAC2Q9UJ37 374 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 SPEF1Q9Y4P9 236 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 PNMA8CA0A1B0GUJ8 204 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 TMEM212A6NML5 194 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 CCRL2O00421 344 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 PLPP2O43688 288 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 CD1AP06126 327 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 SLC2A1P11166 492 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 CD53P19397 219 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 RAD52P43351 418 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 MFGE8Q08431 387 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-208ENST00000564247 MALLQ13021 153 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 BLMHQ13867 455 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 TRAM1Q15629 374 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 WDR38Q5JTN6 314 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 TMEM244Q5VVB8 128 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 DMKNQ6E0U4 476 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-208ENST00000564247 ELMOD2Q8IZ81 293 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 PRSS35Q8N3Z0 413 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 SMIM19Q96E16 107 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 ESRP2Q9H6T0 727 aaKnown RBP14.65□□□□□ -0.06
CMTM3-208ENST00000564247 G6PC2Q9NQR9 355 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 TBCCD1Q9NVR7 557 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 NPAP1Q9NZP6 1156 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 SLC22A13Q9Y226 551 aa14.65□□□□□ -0.06
CMTM3-208ENST00000564247 SIRT4Q9Y6E7 314 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-208ENST00000564247 J3QW42 95 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 GPRIN2O60269 458 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 UBCP0CG48 685 aaKnown RBP14.64□□□□□ -0.07
CMTM3-208ENST00000564247 CD40P25942 277 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 PCSK6P29122 969 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 NANOS3P60323 173 aaKnown RBP14.64□□□□□ -0.07
CMTM3-208ENST00000564247 NAAAQ02083 359 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 C1orf174Q8IYL3 243 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 MS4A15Q8N5U1 240 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 NRGNQ92686 78 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 GHSRQ92847 366 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 RNF166Q96A37 237 aaPredicted RBP14.64□□□□□ -0.07
CMTM3-208ENST00000564247 ITGB1BP2Q9UKP3 347 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF281Q9Y2X9 895 aa14.64□□□□□ -0.07
CMTM3-208ENST00000564247 IGHV2OR16-5A0A0B4J2B6 119 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 OR4C45A6NMZ5 311 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 XRCC2O43543 280 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 ATE1O95260 518 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF35P13682 527 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 CD36P16671 472 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 PSMA1P25786 263 aaKnown RBP14.63□□□□□ -0.07
CMTM3-208ENST00000564247 LIPAP38571 399 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 KIR3DL2P43630 455 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 UCP2P55851 309 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 ODF4Q2M2E3 257 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 SEZ6L2Q6UXD5 910 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 COLCA1Q6ZS62 124 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 PRSS45Q7RTY3 260 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 MYPOPQ86VE0 399 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-208ENST00000564247 COMMD2Q86X83 199 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 PHC2Q8IXK0 858 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 PAQR4Q8N4S7 273 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-208ENST00000564247 OR8B12Q8NGG6 310 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 RPS4Y2Q8TD47 263 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 NINJ1Q92982 152 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 PPP1R14AQ96A00 147 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 TMIGD2Q96BF3 282 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 BCL2L14Q9BZR8 327 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 RGCCQ9H4X1 137 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF391Q9UJN7 358 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 EDARQ9UNE0 448 aa14.63□□□□□ -0.07
CMTM3-208ENST00000564247 A0A0U1RQV5 110 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 A0A1B0GVI7 797 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 ZFPL1O95159 310 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 SERPINA3P01011 423 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 TTRP02766 147 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF12P17014 697 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 TUBG1P23258 451 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 CFL1P23528 166 aaKnown RBP14.62□□□□□ -0.07
CMTM3-208ENST00000564247 WNT5AP41221 380 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 HGFACQ04756 655 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 DOC2BQ14184 412 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 TESK1Q15569 626 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 GFOD2Q3B7J2 385 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 BEX5Q5H9J7 111 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 OR13F1Q8NGS4 319 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 ABHD4Q8TB40 342 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 AKAP1Q92667 903 aaKnown RBP eCLIP14.62□□□□□ -0.072e-6■■■□□ 17.2
CMTM3-208ENST00000564247 SGK3Q96BR1 496 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms