RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PAX9P55771 341 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 CRADDP78560 199 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 SMAD3P84022 425 aaKnown RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 GAGE5Q13069 117 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 GAGE6Q13070 117 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 TMEM192Q8IY95 271 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 TOMM5Q8N4H5 51 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 SLC5A8Q8N695 610 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 OR52E5Q8NH55 327 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 OR52P1PQ8NH57 321 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 NETO1Q8TDF5 533 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 DIO2Q92813 273 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 TMEM125Q96AQ2 219 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 LRRC58Q96CX6 371 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 OR7D2Q96RA2 312 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 RSPO3Q9BXY4 272 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 RBM22Q9NW64 420 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDH1-205ENST00000562836 ITGB4P16144 1822 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MYADML2A6NDP7 307 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 GGT3PA6NGU5 568 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 ZNF727A8MUV8 499 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 OR1F1O43749 312 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 B4GALT3O60512 393 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 SMIM10L1P0DMW3 83 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 ADORA2BP29275 332 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 H2BFSP57053 126 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 ZNF585BQ52M93 769 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 TIFABQ6ZNK6 161 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 BEST3Q8N1M1 668 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 RNF152Q8N8N0 203 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 OR4D9Q8NGE8 314 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 OR5M3Q8NGP4 307 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 SDSLQ96GA7 329 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 SMIM10Q96HG1 83 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 NAA38Q9BRA0 125 aaKnown RBP8.4□□□□□ -1.06
CDH1-205ENST00000562836 OR51I2Q9H344 312 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 TRIM36Q9NQ86 728 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 OSGIN2Q9Y236 505 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 RFXANKO14593 260 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 CSO75390 466 aaKnown RBP8.4□□□□□ -1.06
CDH1-205ENST00000562836 PTPN7P35236 360 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 OR3A2P47893 321 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 CDK5Q00535 292 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 TMEM115Q12893 351 aaPredicted RBP8.4□□□□□ -1.06
CDH1-205ENST00000562836 IL10RAQ13651 578 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 HMGN3Q15651 99 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MST1LQ2TV78 715 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 SLC36A2Q495M3 483 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 SFRP4Q6FHJ7 346 aaPredicted RBP8.4□□□□□ -1.06
CDH1-205ENST00000562836 UNQ6126/PRO20091Q6UXV3 157 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 TPRG1Q6ZUI0 275 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MBOAT2Q6ZWT7 520 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MEPCEQ7L2J0 689 aaKnown RBP8.4□□□□□ -1.06
CDH1-205ENST00000562836 OLIG3Q7RTU3 272 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 BCORP1Q8N888 145 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 OR5D16Q8NGK9 328 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 NUDCD2Q8WVJ2 157 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MUCL1Q96DR8 90 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MYEOVQ96EZ4 313 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 COPS8Q99627 209 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 C19orf24Q9BVV8 132 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 ZNF586Q9NXT0 402 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 LRIT1Q9P2V4 623 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 HES2Q9Y543 173 aa8.4□□□□□ -1.06
CDH1-205ENST00000562836 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.07
CDH1-205ENST00000562836 IGSF23A1L1A6 192 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SAP18O00422 153 aaKnown RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 XRCC2O43543 280 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 STK16O75716 305 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SCG5P05408 212 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ST6GAL1P15907 406 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 GPR6P46095 362 aaPredicted RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 TAS2R43P59537 309 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 TEAD2Q15562 447 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 NKG7Q16617 165 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ZNF549Q6P9A3 640 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SP7Q8TDD2 431 aaPredicted RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 GALMQ96C23 342 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 GNRHR2Q96P88 292 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 MS4A5Q9H3V2 200 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 NECAP2Q9NVZ3 263 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PLA2G3Q9NZ20 509 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 HHLA2Q9UM44 414 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PHLPP1O60346 1717 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 BCL2L11O43521 198 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PRAF2O60831 178 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 RAD51DO75771 328 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 TOX4O94842 621 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SERPIND1P05546 499 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 CHRM4P08173 479 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 CD1CP29017 333 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 AGTR1P30556 359 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 RPL22P35268 128 aaKnown RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 HTR6P50406 440 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 DAPP51397 102 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 LILRA4P59901 499 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SEC61GP60059 68 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms