RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 Q6ZR03 302 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 USP51Q70EK9 711 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 PGAP1Q75T13 922 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 SPATC1Q76KD6 591 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 MEPCEQ7L2J0 689 aaKnown RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 SLC16A9Q7RTY1 509 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 PQLC1Q8N2U9 271 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 ZNF283Q8N7M2 679 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 OR8G5Q8NG78 346 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 THEM6Q8WUY1 208 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 ELMOD3Q96FG2 381 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 ZNF582Q96NG8 517 aaPredicted RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 C9orf16Q9BUW7 83 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 YIPF3Q9GZM5 350 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 SP140LQ9H930 580 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 ZNF275Q9NSD4 429 aaPredicted RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 CDC14BO60729 498 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 H2BFMP0C1H6 154 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 SRD5A1P18405 259 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 CX3CR1P49238 355 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 CHN2P52757 468 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 TNFAIP6P98066 277 aaPredicted RBP14.04□□□□□ -0.16
CDT1-202ENST00000562747 FAM120AOSQ5T036 256 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 MRPL21Q7Z2W9 205 aaKnown RBP14.04□□□□□ -0.16
CDT1-202ENST00000562747 GID4Q8IVV7 300 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 OR5AS1Q8N127 324 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 OR13G1Q8NGZ3 307 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 STMN2Q93045 179 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 MSI2Q96DH6 328 aaKnown RBP14.04□□□□□ -0.16
CDT1-202ENST00000562747 IL4I1Q96RQ9 567 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 AMELYQ99218 206 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 OPA3Q9H6K4 179 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 IL19Q9UHD0 177 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 LAMP5Q9UJQ1 280 aa14.04□□□□□ -0.16
CDT1-202ENST00000562747 M0R129 80 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 XRCC2O43543 280 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 LILRA1O75019 489 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 TNFRSF1AP19438 455 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 ALOX5APP20292 161 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 THBS2P35442 1172 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 GZMKP49863 264 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 CDC42P60953 191 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 HFEQ30201 348 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 BCDIN3DQ7Z5W3 292 aaKnown RBP14.03□□□□□ -0.16
CDT1-202ENST00000562747 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.03□□□□□ -0.16
CDT1-202ENST00000562747 CBR4Q8N4T8 237 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 OR2Z1Q8NG97 314 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 OR8J1Q8NGP2 316 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 HPS1Q92902 700 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 SLC30A2Q9BRI3 323 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 NIPAL2Q9H841 368 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 HAO2Q9NYQ3 351 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 TMEM14AQ9Y6G1 99 aa14.03□□□□□ -0.16
CDT1-202ENST00000562747 A0A1B0GWJ7 208 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 HAX1O00165 279 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 PPIHO43447 177 aaKnown RBP14.02□□□□□ -0.17
CDT1-202ENST00000562747 ANXA2P07355 339 aaKnown RBP14.02□□□□□ -0.17
CDT1-202ENST00000562747 SLC2A1P11166 492 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 ZNF92Q03936 586 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 SLC3A1Q07837 685 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 TRIP10Q15642 601 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 GLYATL3Q5SZD4 288 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 FAM166AQ6J272 317 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 KCTD18Q6PI47 426 aaPredicted RBP14.02□□□□□ -0.17
CDT1-202ENST00000562747 DEGS2Q6QHC5 323 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 PRSS45Q7RTY3 260 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 OR52H1Q8NGJ2 320 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 TRUB1Q8WWH5 349 aaKnown RBP14.02□□□□□ -0.17
CDT1-202ENST00000562747 SPSB4Q96A44 273 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 HRASLS5Q96KN8 279 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 CNN2Q99439 309 aaKnown RBP14.02□□□□□ -0.17
CDT1-202ENST00000562747 MNTQ99583 582 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 SOX7Q9BT81 388 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 TMEM100Q9NV29 134 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 KCNS2Q9ULS6 477 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 KLHDC2Q9Y2U9 406 aa14.02□□□□□ -0.17
CDT1-202ENST00000562747 LOC100289279A0A1B0GTE1 492 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 CLDN25C9JDP6 229 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 MRPL3P09001 348 aaKnown RBP14.01□□□□□ -0.17
CDT1-202ENST00000562747 ANOS1P23352 680 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 ZNF121P58317 390 aaPredicted RBP14.01□□□□□ -0.17
CDT1-202ENST00000562747 GABPB1Q06547 395 aaPredicted RBP14.01□□□□□ -0.17
CDT1-202ENST00000562747 ZSCAN26Q16670 478 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 ZBTB49Q6ZSB9 765 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 BHLHE23Q8NDY6 225 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 OR2AE1Q8NHA4 323 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 SPRYD4Q8WW59 207 aaPredicted RBP14.01□□□□□ -0.17
CDT1-202ENST00000562747 ASB17Q8WXJ9 295 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 CCL17Q92583 94 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 SLC22A4Q9H015 551 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 DNAJC27Q9NZQ0 273 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 WARS2Q9UGM6 360 aaKnown RBP14.01□□□□□ -0.17
CDT1-202ENST00000562747 NOP16Q9Y3C1 178 aaKnown RBP14.01□□□□□ -0.17
CDT1-202ENST00000562747 CACNG2Q9Y698 323 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 TANC2Q9HCD6 1990 aa14.01□□□□□ -0.17
CDT1-202ENST00000562747 LRP5LA4QPB2 252 aa14□□□□□ -0.17
CDT1-202ENST00000562747 C5orf63A6NC05 138 aa14□□□□□ -0.17
CDT1-202ENST00000562747 GGT3PA6NGU5 568 aa14□□□□□ -0.17
CDT1-202ENST00000562747 CD300LBA8K4G0 201 aa14□□□□□ -0.17
CDT1-202ENST00000562747 E9PQ18 207 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms