RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ADAM20O43506 726 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 MELTFP08582 738 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 HIST1H1CP16403 213 aaKnown RBP10.79□□□□□ -0.68
SF3B3-202ENST00000562722 PSMB10P40306 273 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 SPIBQ01892 262 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 RSPO1Q2MKA7 263 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-202ENST00000562722 RFX4Q33E94 735 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 ZNF841Q6ZN19 808 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 NAA40Q86UY6 237 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 PNLDC1Q8NA58 520 aaKnown RBP10.79□□□□□ -0.68
SF3B3-202ENST00000562722 SCCPDHQ8NBX0 429 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 SSMEM1Q8WWF3 244 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 SPTSSAQ969W0 71 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 FAM71F1Q96KD3 344 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-202ENST00000562722 SLC22A4Q9H015 551 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 OR52D1Q9H346 318 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 FN3KQ9H479 309 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 PRDM13Q9H4Q3 707 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 C1RLQ9NZP8 487 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 PDP1Q9P0J1 537 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-202ENST00000562722 SAMD4AQ9UPU9 718 aaKnown RBP10.79□□□□□ -0.68
SF3B3-202ENST00000562722 CENPVL3A0A0U1RRI6 287 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 A0A1B0GWJ7 208 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 hCG_1807616A0A1W2PRN6 198 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 CLPSL1A2RUU4 121 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 A6NLC8 198 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 CD300LBA8K4G0 201 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 M0R135 149 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 LGALS8O00214 317 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 CCDC22O60826 627 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 SASH3O75995 380 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 NDUFA7O95182 113 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 LIPFP07098 398 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 ZNF823P16415 610 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 SMIM11AP58511 58 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 PDCD1Q15116 288 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 KRTAP27-1Q3LI81 207 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 GLYATQ6IB77 296 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 ZNF620Q6ZNG0 422 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 LNX2Q8N448 690 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 SDR9C7Q8NEX9 313 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 TBC1D15Q8TC07 691 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 LHX4Q969G2 390 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 UBE2FQ969M7 185 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 ZNF799Q96GE5 643 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 WDFY2Q96P53 400 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 TRIM15Q9C019 465 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 TRIM36Q9NQ86 728 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 ACOXLQ9NUZ1 547 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 C1orf123Q9NWV4 160 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 CYB5R1Q9UHQ9 305 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 N6AMT1Q9Y5N5 214 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 POMT1Q9Y6A1 747 aa10.78□□□□□ -0.68
SF3B3-202ENST00000562722 TRAV38-1A0A0B4J264 116 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 OOEPA6NGQ2 149 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 TNFRSF13BO14836 293 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-202ENST00000562722 TIMM23O14925 209 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 ARPC3O15145 178 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 OR10H3O60404 316 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 GMDSO60547 372 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 GADD45GO95257 159 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 GYPAP02724 150 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 GRPP07492 148 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 PSME3P61289 254 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 RELBQ01201 579 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 PDZD9Q8IXQ8 264 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 FAM86B1Q8N7N1 296 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 PROKR2Q8NFJ6 384 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 OR2AE1Q8NHA4 323 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 TBX15Q96SF7 602 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 RASSF4Q9H2L5 321 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 PNRC2Q9NPJ4 139 aaKnown RBP10.77□□□□□ -0.69
SF3B3-202ENST00000562722 DCAF13Q9NV06 445 aaKnown RBP10.77□□□□□ -0.69
SF3B3-202ENST00000562722 ADA2Q9NZK5 511 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 CMYA5Q8N3K9 4069 aa10.77□□□□□ -0.69
SF3B3-202ENST00000562722 IGHV1-69DA0A0B4J2H0 117 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-202ENST00000562722 OR6C68A6NDL8 312 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 NDUFA2O43678 99 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 IGHV1-69P01742 117 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 H2AFXP16104 143 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-202ENST00000562722 IFNGR2P38484 337 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 ARF6P62330 175 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 ZNF92Q03936 586 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3B3-202ENST00000562722 MZT1Q08AG7 82 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 TAF13Q15543 124 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 SNAI3Q3KNW1 292 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 C8orf82Q6P1X6 216 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-202ENST00000562722 HACD2Q6Y1H2 254 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 ZNF826PQ6ZT77 177 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 ZBTB46Q86UZ6 589 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 RNF148Q8N7C7 305 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 OR4C15Q8NGM1 316 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 ST8SIA4Q92187 359 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 DYRK2Q92630 601 aa10.76□□□□□ -0.69
SF3B3-202ENST00000562722 MCUR1Q96AQ8 359 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms