RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 RAP1AP62834 184 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 HHEXQ03014 270 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 DEFB110Q30KQ9 67 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 DNLZQ5SXM8 178 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 PRAMEF8Q5VWM4 474 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 PRAMEF7Q5VXH5 474 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 ANKRD16Q6P6B7 361 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 Q6ZRG5 221 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 ZNF664Q8N3J9 261 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 ZNF610Q8N9Z0 462 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 OR51D1Q8NGF3 324 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 RAB24Q969Q5 203 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
CLK3-206ENST00000562078 JSRP1Q96MG2 331 aaPredicted RBP11.91□□□□□ -0.5
CLK3-206ENST00000562078 ARID1AO14497 2285 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 TMEM235A6NFC5 223 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 UMAD1C9J7I0 102 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 RPL36A-HNRNPH2H7BZ11 118 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 HCRTR1O43613 425 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 NPSP0C0P6 89 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 CPMP14384 443 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 BCKDHBP21953 392 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 CD38P28907 300 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 WDR88Q6ZMY6 472 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 RNF44Q7L0R7 432 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 PRSS58Q8IYP2 241 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 CSNK1A1LQ8N752 337 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 TMEM52Q8NDY8 209 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 OR1J1Q8NGS3 322 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 FAM174AQ8TBP5 190 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 GALNT14Q96FL9 552 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 ADAM19Q9H013 955 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 UBQLN4Q9NRR5 601 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 CALML5Q9NZT1 146 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 MRPS33Q9Y291 106 aaKnown RBP11.91□□□□□ -0.5
CLK3-206ENST00000562078 ZNF281Q9Y2X9 895 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 CACNA1IQ9P0X4 2223 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 ZNF735P0CB33 412 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 ZNF28P17035 718 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 HLA-GP17693 338 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 TAS2R19P59542 299 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 ACTA2P62736 377 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 ACTG2P63267 376 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 DMWDQ09019 674 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 C14orf28Q4W4Y0 310 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 ZNF529Q6P280 563 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 TMEM205Q6UW68 189 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 OOSP2Q86WS3 158 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 CDK20Q8IZL9 346 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 SYS1Q8N2H4 156 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 OR2L13Q8N349 312 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 OR51A7Q8NH64 312 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 PHYHIPQ92561 330 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 S100A13Q99584 98 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 DDA1Q9BW61 102 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 SNHG12Q9BXW3 62 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 GPR27Q9NS67 375 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 FAM212BQ9NTI7 297 aaPredicted RBP11.9□□□□□ -0.5
CLK3-206ENST00000562078 PRODH2Q9UF12 536 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 GOLT1BQ9Y3E0 138 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 FLVCR1Q9Y5Y0 555 aa11.9□□□□□ -0.5
CLK3-206ENST00000562078 FGF17O60258 216 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 OR8G3PP0DMU2 310 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 GRPRP30550 384 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 MAS1LP35410 378 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 APLNRP35414 380 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 SERPINF1P36955 418 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 PPICP45877 212 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 BLKP51451 505 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 IL13RA1P78552 427 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 INSM1Q01101 510 aaPredicted RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 RHEBQ15382 184 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 TRMT12Q53H54 448 aaKnown RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 RNASE10Q5GAN6 216 aaKnown RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 MITD1Q8WV92 249 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 SLC25A36Q96CQ1 311 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 SLC6A7Q99884 636 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 LRRC61Q9BV99 259 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 LYRM4Q9HD34 91 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 MYOZ1Q9NP98 299 aaPredicted RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 ADAP2Q9NPF8 381 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 TRAV8-7A0A075B6U6 113 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 TVP23AA6NH52 213 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 ZNF724A8MTY0 619 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 ADAP1O75689 374 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 CTSBP07858 339 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 SLC6A9P48067 706 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 EBPQ15125 230 aaKnown RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 LANCL3Q6ZV70 420 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 CD163Q86VB7 1156 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 RANBP3LQ86VV4 465 aaPredicted RBP11.89□□□□□ -0.51
CLK3-206ENST00000562078 SLC35F2Q8IXU6 374 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 GPR137CQ8N3F9 429 aa11.89□□□□□ -0.51
CLK3-206ENST00000562078 NAXEQ8NCW5 288 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms