RNA–Protein interactions for RNA: ENST00000561790.1

RAB43P1-201, Transcript of RAB43 pseudogene 1, humanhuman

BASIC

Gene RAB43P1, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43P1-201ENST00000561790 SMARCD3Q6STE5 483 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 LINC00346Q8IVM7 164 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 ATF6BQ99941 703 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 ACOXLQ9NUZ1 547 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 RNF114Q9Y508 228 aa12.72□□□□□ -0.37
RAB43P1-201ENST00000561790 IGLV1-36A0A0B4J1U3 117 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 C3orf80F5H4A9 247 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 SLC22A2O15244 555 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 HLA-DQA2P01906 255 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 CA6P23280 308 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 GGT2P36268 569 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 SLC7A2P52569 658 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 TPTEP56180 551 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 TRAP1Q12931 704 aaKnown RBP12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 SLC18B1Q6NT16 456 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 CFAP77Q6ZQR2 320 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 OR6V1Q8N148 313 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 SLC26A10Q8NG04 563 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 DYRK2Q92630 601 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 WDFY2Q96P53 400 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 TBX15Q96SF7 602 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 NMNAT3Q96T66 252 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 TRIM36Q9NQ86 728 aa12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.37
RAB43P1-201ENST00000561790 TRAV38-1A0A0B4J264 116 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 NME4O00746 187 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 NDUFA2O43678 99 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 RHCEP18577 417 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 SLC6A6P31641 620 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 GSK3BP49841 420 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 FXYD6P3P58550 94 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 KRT72Q14CN4 511 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 KRTAP27-1Q3LI81 207 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 TSEN54Q7Z6J9 526 aaKnown RBP12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 NAA40Q86UY6 237 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 OR52J3Q8NH60 311 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 FANK1Q8TC84 345 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 LHX4Q969G2 390 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 SPTSSAQ969W0 71 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 HOPXQ9BPY8 73 aaPredicted RBP12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 KCTD14Q9BQ13 255 aaPredicted RBP12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 ADAT1Q9BUB4 502 aaKnown RBP12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 RPRD1BQ9NQG5 326 aaKnown RBP12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 CTSZQ9UBR2 303 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 ARL2BPQ9Y2Y0 163 aa12.7□□□□□ -0.38
RAB43P1-201ENST00000561790 TRBV4-1A0A0J9YWV2 114 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 OOEPA6NGQ2 149 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 GGT3PA6NGU5 568 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 A6NLC8 198 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 CD300LBA8K4G0 201 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 NDUFAB1O14561 156 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 GPR137BO60478 399 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 GMDSO60547 372 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 CCDC22O60826 627 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 MMP9P14780 707 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 NCK1P16333 377 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 NOS3P29474 1203 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 HOXA4Q00056 320 aaPredicted RBP12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 SEC23BQ15437 767 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 RHOUQ7L0Q8 258 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 PLPP7Q8NBV4 271 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 OR4K13Q8NH42 304 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 PKP2Q99959 881 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 RBM4BQ9BQ04 359 aaKnown RBP12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 IFT27Q9BW83 186 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 C1orf123Q9NWV4 160 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 NDUFAF4Q9P032 175 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 CYB5R1Q9UHQ9 305 aa12.69□□□□□ -0.38
RAB43P1-201ENST00000561790 hCG_1807616A0A1W2PRN6 198 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 M0R135 149 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 FAM107AO95990 144 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 IGHV4-59P01825 116 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 GYPAP02724 150 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 GRPP07492 148 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 COX4I1P13073 169 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 HIST1H1CP16403 213 aaKnown RBP12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 ZNF823P16415 610 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 ARF6P62330 175 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 MZT1Q08AG7 82 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 DBPQ10586 325 aaPredicted RBP12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 TAF9Q16594 264 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 RFX4Q33E94 735 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 CCDC197Q8NCU1 140 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 SIRPDQ9H106 197 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
RAB43P1-201ENST00000561790 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms