RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SLC30A2Q9BRI3 323 aa11.77□□□□□ -0.53
TPM1-230ENST00000561266 REPIN1Q9BWE0 567 aaKnown RBP11.77□□□□□ -0.53
TPM1-230ENST00000561266 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
TPM1-230ENST00000561266 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.53
TPM1-230ENST00000561266 CHODLQ9H9P2 273 aa11.77□□□□□ -0.53
TPM1-230ENST00000561266 BRD7Q9NPI1 651 aa11.77□□□□□ -0.53
TPM1-230ENST00000561266 LRP12Q9Y561 859 aa11.77□□□□□ -0.53
TPM1-230ENST00000561266 A0A1B0GWJ7 208 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 PLSCR5A0PG75 271 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 TPD52L2O43399 206 aaKnown RBP11.76□□□□□ -0.53
TPM1-230ENST00000561266 H2BFMP0C1H6 154 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 ACHEP22303 614 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 PMELP40967 661 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 MRPS11P82912 194 aaKnown RBP11.76□□□□□ -0.53
TPM1-230ENST00000561266 TNFAIP6P98066 277 aaPredicted RBP11.76□□□□□ -0.53
TPM1-230ENST00000561266 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
TPM1-230ENST00000561266 GABPB1Q06547 395 aaPredicted RBP11.76□□□□□ -0.53
TPM1-230ENST00000561266 FAM209AQ5JX71 171 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 AVPI1Q5T686 147 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 ZBTB49Q6ZSB9 765 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 FAM81AQ8TBF8 368 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 DVL3Q92997 716 aaPredicted RBP11.76□□□□□ -0.53
TPM1-230ENST00000561266 ELMOD3Q96FG2 381 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 C9orf16Q9BUW7 83 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 NARFLQ9H6Q4 476 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 CYSLTR2Q9NS75 346 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 DECR2Q9NUI1 292 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 ZDHHC8Q9ULC8 765 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 C2CD3Q4AC94 2353 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
TPM1-230ENST00000561266 CD300LBA8K4G0 201 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 F5H5P2 479 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 TBX1O43435 398 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 CD5LO43866 347 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 ENTPD6O75354 484 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 ANXA2P07355 339 aaKnown RBP11.75□□□□□ -0.53
TPM1-230ENST00000561266 SBK2P0C263 348 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 ANPEPP15144 967 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 HOXB4P17483 251 aaPredicted RBP11.75□□□□□ -0.53
TPM1-230ENST00000561266 GABRB1P18505 474 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 HSD11B1P28845 292 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 LIPAP38571 399 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 GPR6P46095 362 aaPredicted RBP11.75□□□□□ -0.53
TPM1-230ENST00000561266 FAM3AP98173 230 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 RCN1Q15293 331 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 LRRC36Q1X8D7 754 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 PGAP1Q75T13 922 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 RHOUQ7L0Q8 258 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 SLC35F2Q8IXU6 374 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 OR51G2Q8NGK0 314 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 CLDND2Q8NHS1 167 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 SPSB4Q96A44 273 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 TBX5Q99593 518 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 APOL4Q9BPW4 351 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 HAO2Q9NYQ3 351 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 ENOPH1Q9UHY7 261 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
TPM1-230ENST00000561266 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 PNPP00491 289 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 MT-ND5P03915 603 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 PEX2P28328 305 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 HTR1FP30939 366 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 SLC15A1P46059 708 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 CXCR4P61073 352 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 MVKQ03426 396 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 MALLQ13021 153 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 MAB21L1Q13394 359 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 PLEKHG7Q6ZR37 379 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 MRPL21Q7Z2W9 205 aaKnown RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 OR8B12Q8NGG6 310 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 OR56B2PQ8NGI1 322 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 OR8J1Q8NGP2 316 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 ZNF420Q8TAQ5 688 aaPredicted RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 CCL17Q92583 94 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 MSI2Q96DH6 328 aaKnown RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 MEGF10Q96KG7 1140 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 OR2V2Q96R30 315 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 OR8B4Q96RC9 309 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 SIGLEC11Q96RL6 698 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 CNN2Q99439 309 aaKnown RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 PRRG3Q9BZD7 231 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 FAM118AQ9NWS6 357 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 FAM206AQ9NX38 181 aa11.74□□□□□ -0.53
TPM1-230ENST00000561266 H2AFY2Q9P0M6 372 aaPredicted RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 CGGBP1Q9UFW8 167 aaPredicted RBP11.74□□□□□ -0.53
TPM1-230ENST00000561266 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 ERICH4A6NGS2 130 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 SLC22A31A6NKX4 558 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 FAM157AC9JC47 383 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms