RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OR8G5Q8NG78 346 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 ST7LQ8TDW4 575 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 ZNRF4Q8WWF5 429 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 RDH5Q92781 318 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 HPS1Q92902 700 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 RAB1CQ92928 201 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 UBE2FQ969M7 185 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 MARS2Q96GW9 593 aaKnown RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 MICU1Q9BPX6 476 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 CCDC90BQ9GZT6 254 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 ADGRL4Q9HBW9 690 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 AMBNQ9NP70 447 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 RAB26Q9ULW5 256 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 LRP12Q9Y561 859 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 R4GMQ9 66 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 MYO18BQ8IUG5 2567 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 INTS1Q8N201 2190 aaKnown RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 BSNQ9UPA5 3926 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 PTGES3LE9PB15 166 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 IFNL4K9M1U5 179 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 NDUFS8O00217 210 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 MAGEB3O15480 346 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 GMDSO60547 372 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 CCDC159P0C7I6 412 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 ZNF20P17024 532 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 CDH15P55291 814 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 PSMA6P60900 246 aaKnown RBP9.19□□□□□ -0.94
TPM1-229ENST00000561242 ERVS71-1P61550 626 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 ROM1Q03395 351 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 ZNF91Q05481 1191 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 RIPPLY1Q0D2K3 151 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 PSG7Q13046 419 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 TMEM244Q5VVB8 128 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 FBXW12Q6X9E4 464 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 LHFPL3Q86UP9 236 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 C1orf87Q8N0U7 546 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 ZNF676Q8N7Q3 588 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 SEMA6DQ8NFY4 1073 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 CNBD2Q96M20 576 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 ALG8Q9BVK2 526 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 PAPOLGQ9BWT3 736 aaKnown RBP9.19□□□□□ -0.94
TPM1-229ENST00000561242 PBOV1Q9GZY1 135 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 ZNF701Q9NV72 531 aaPredicted RBP9.19□□□□□ -0.94
TPM1-229ENST00000561242 OR52A1Q9UKL2 312 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 PCDHB10Q9UN67 800 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 SLC7A11Q9UPY5 501 aa9.19□□□□□ -0.94
TPM1-229ENST00000561242 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 LOC390937A0A1W2PQ73 354 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 A6NLC8 198 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 CD300LBA8K4G0 201 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 PPIHO43447 177 aaKnown RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 SYT7O43581 403 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 ICMTO60725 284 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 CLIC3O95833 236 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 UBCP0CG48 685 aaKnown RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 SLC25A16P16260 332 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 KITLGP21583 273 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 MPV17P39210 176 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 AQP4P55087 323 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 ADARB1P78563 741 aaKnown RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 CCL8P80075 99 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 EFNB1P98172 346 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 DBPQ10586 325 aaPredicted RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 CDK5R2Q13319 367 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 GALEQ14376 348 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 GK2Q14410 553 aaPredicted RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 HLXQ14774 488 aaPredicted RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 TESK1Q15569 626 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 KCNJ8Q15842 424 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 GLYATL3Q5SZD4 288 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 DOK3Q7L591 496 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 LRP11Q86VZ4 500 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 CNIH3Q8TBE1 160 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 PIGCQ92535 297 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 CCL17Q92583 94 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 TFAP2CQ92754 450 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 LGALS12Q96DT0 336 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 FAM71F1Q96KD3 344 aaPredicted RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 PCNX1Q96RV3 2341 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 ZNF184Q99676 751 aaPredicted RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 MSL2Q9HCI7 577 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 CNOT2Q9NZN8 540 aaKnown RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 ENPP5Q9UJA9 477 aa9.18□□□□□ -0.94
TPM1-229ENST00000561242 EXOGQ9Y2C4 368 aaKnown RBP9.18□□□□□ -0.94
TPM1-229ENST00000561242 IGLV3-9A0A075B6K5 115 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 IGHV1-69-2A0A0G2JMI3 117 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 A0A1W2PPR1 153 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 hCG_1807616A0A1W2PRN6 198 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 ISPDA4D126 451 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 IQCF6A8MYZ5 107 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 CLDN25C9JDP6 229 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 OVOL3O00110 214 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 CYB5AP00167 134 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 CD8AP01732 235 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 GPR6P46095 362 aaPredicted RBP9.17□□□□□ -0.94
TPM1-229ENST00000561242 MMP16P51512 607 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 TMEM33P57088 247 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 TAS2R43P59537 309 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 ZNF92Q03936 586 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms