RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 ZNF454Q8N9F8 522 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 OR10AD1Q8NGE0 317 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 UTP4Q969X6 686 aaKnown RBP13.45□□□□□ -0.26
LMX1B-204ENST00000561065 SLCO4A1Q96BD0 722 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 ZNF799Q96GE5 643 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 FAHD2AQ96GK7 314 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 OR2V2Q96R30 315 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 KCNJ15Q99712 375 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 COPS4Q9BT78 406 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 OR51V1Q9H2C8 321 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 WDR76Q9H967 626 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 KRT84Q9NSB2 600 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 DDX28Q9NUL7 540 aaKnown RBP13.45□□□□□ -0.26
LMX1B-204ENST00000561065 TMEM100Q9NV29 134 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 UBAP1Q9NZ09 502 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 COMMD3-BMI1R4GMX3 469 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 MLNRO43193 412 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 GYPBP06028 91 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 ADRA2CP18825 462 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 ZFP36P26651 326 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 HSD11B1P28845 292 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 RPS27P42677 84 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 SRP9P49458 86 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 MMP16P51512 607 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 SEC61A1P61619 476 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 RPS7P62081 194 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 MZT1Q08AG7 82 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 ZFP1Q6P2D0 407 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 MRPL21Q7Z2W9 205 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 ERI1Q8IV48 349 aaKnown RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 ZNF511Q8NB15 262 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 OR8G5Q8NG78 346 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 OR10S1Q8NGN2 331 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 CENPNQ96H22 339 aaPredicted RBP13.44□□□□□ -0.26
LMX1B-204ENST00000561065 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 NTN4Q9HB63 628 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 SLC25A19Q9HC21 320 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
LMX1B-204ENST00000561065 A0A0G2JMP0 313 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 A0A0X1KG70 313 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 H0YL77 283 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 CFL1P23528 166 aaKnown RBP13.43□□□□□ -0.26
LMX1B-204ENST00000561065 LCN2P80188 198 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 EIF2B1Q14232 305 aaKnown RBP13.43□□□□□ -0.26
LMX1B-204ENST00000561065 ZMYND11Q15326 602 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 SNCBQ16143 134 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 KLHL12Q53G59 568 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 LCN1P1Q5VSP4 162 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 PLBD1Q6P4A8 553 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 FAHD1Q6P587 224 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 NAA40Q86UY6 237 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 TEX29Q8N6K0 151 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 IQCF1Q8N6M8 205 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.43□□□□□ -0.26
LMX1B-204ENST00000561065 OR4M2Q8NGB6 313 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 SLAMF6Q96DU3 332 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 RAB3IPQ96QF0 476 aaPredicted RBP13.43□□□□□ -0.26
LMX1B-204ENST00000561065 TVP23BQ9NYZ1 205 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 OPN4Q9UHM6 478 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 ORC6Q9Y5N6 252 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 TMEM14AQ9Y6G1 99 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 TENM1Q9UKZ4 2725 aa13.43□□□□□ -0.26
LMX1B-204ENST00000561065 C5orf63A6NC05 138 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 FAM183AA6NL82 134 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 LRRC30A6NM36 301 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 IQCF6A8MYZ5 107 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 XRCC2O43543 280 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 FSHBP01225 129 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 EPHA1P21709 976 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 DDOSTP39656 456 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 ACTR3P61158 418 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 BTG1P62324 171 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 DCAF12L2Q5VW00 463 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 LIPNQ5VXI9 398 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 ASRGL1Q7L266 308 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 DPY19L4Q7Z388 723 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 C1QL2Q7Z5L3 287 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 CPOQ8IVL8 374 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 HS3ST5Q8IZT8 346 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 BHLHE23Q8NDY6 225 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 OR52H1Q8NGJ2 320 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 ZNF420Q8TAQ5 688 aaPredicted RBP13.42□□□□□ -0.26
LMX1B-204ENST00000561065 MEGF10Q96KG7 1140 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 SLC30A2Q9BRI3 323 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 NIPAL2Q9H841 368 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 PPP1R3CQ9UQK1 317 aa13.42□□□□□ -0.26
LMX1B-204ENST00000561065 IGHV3-64DA0A0J9YX35 117 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 A0A1B0GWJ7 208 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 F5H0A9 414 aaPredicted RBP13.41□□□□□ -0.26
LMX1B-204ENST00000561065 H2BFMP0C1H6 154 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 SBK2P0C263 348 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 CPT2P23786 658 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 DAPP51397 102 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 PTGES3Q15185 160 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms