RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CRABP1P29762 137 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 HOXA4Q00056 320 aaPredicted RBP15.22■□□□□ 0.03
TPM1-226ENST00000560959 VAX1Q5SQQ9 334 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 OTPQ5XKR4 325 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 FAM90A1Q86YD7 464 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 DTX3Q8N9I9 347 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 SLCO4A1Q96BD0 722 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 RERGLQ9H628 205 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
TPM1-226ENST00000560959 RPS6KA6Q9UK32 745 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 AURKCQ9UQB9 309 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
TPM1-226ENST00000560959 RYR3Q15413 4870 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 PTP4A3O75365 173 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 PPP1R3DO95685 299 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 CA6P23280 308 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 EFNB2P52799 333 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 MZT1Q08AG7 82 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 RABL3Q5HYI8 236 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 DNM1P34Q6PK57 102 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 ZNF730Q6ZMV8 503 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 CMTM4Q8IZR5 234 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 GCSAMQ8N6F7 178 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 BOLLQ8N9W6 283 aaKnown RBP15.21■□□□□ 0.03
TPM1-226ENST00000560959 LZICQ8WZA0 190 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 TMBIM4Q9HC24 238 aa15.21■□□□□ 0.03
TPM1-226ENST00000560959 CD300LBA8K4G0 201 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 F5H5K5 113 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 FFAR1O14842 300 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 NPFFO15130 113 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 NDUFB2O95178 105 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 TXNDC12O95881 172 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 LCATP04180 440 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 MDH1P40925 334 aaKnown RBP15.2■□□□□ 0.02
TPM1-226ENST00000560959 C1orf122Q6ZSJ8 110 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 TPD52L3Q96J77 140 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 ATF6BQ99941 703 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 ADAT1Q9BUB4 502 aaKnown RBP15.2■□□□□ 0.02
TPM1-226ENST00000560959 PPA2Q9H2U2 334 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 C1orf123Q9NWV4 160 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 MRPL15Q9P015 296 aaKnown RBP15.2■□□□□ 0.02
TPM1-226ENST00000560959 SIGLEC7Q9Y286 467 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 TMEM5Q9Y2B1 443 aa15.2■□□□□ 0.02
TPM1-226ENST00000560959 PAHP00439 452 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 IFNW1P05000 195 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 MUC1P15941 1255 aaPredicted RBP15.19■□□□□ 0.02
TPM1-226ENST00000560959 GPR4P46093 362 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 PRSS12P56730 875 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 ACSM1Q08AH1 577 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 LRRC23Q53EV4 343 aaPredicted RBP15.19■□□□□ 0.02
TPM1-226ENST00000560959 CORO6Q6QEF8 472 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 TBPL2Q6SJ96 375 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 PTCHD4Q6ZW05 846 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 RRM2BQ7LG56 351 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 MRPL21Q7Z2W9 205 aaKnown RBP15.19■□□□□ 0.02
TPM1-226ENST00000560959 TSEN54Q7Z6J9 526 aaKnown RBP15.19■□□□□ 0.02
TPM1-226ENST00000560959 ST8SIA4Q92187 359 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 PITX2Q99697 317 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 SEMA6AQ9H2E6 1030 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 ANKRD19PQ9H560 264 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 ONECUT1Q9UBC0 465 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 RHCGQ9UBD6 479 aa15.19■□□□□ 0.02
TPM1-226ENST00000560959 IMPA2O14732 288 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 YAP1P46937 504 aaKnown RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 UBE2E1P51965 193 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 TPTEP56180 551 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 EMX1Q04741 257 aaPredicted RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 TRAP1Q12931 704 aaKnown RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 MEP1BQ16820 701 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 SLC36A3Q495N2 470 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 OXLD1Q5BKU9 147 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 COQ5Q5HYK3 327 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 METTL21CQ5VZV1 264 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 SLC18B1Q6NT16 456 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 DPY19L2P2Q6ZN68 376 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 NAA40Q86UY6 237 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 BEND2Q8NDZ0 799 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 SGCDQ92629 289 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 TNFRSF14Q92956 283 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 FAM234AQ9H0X4 552 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 RANBP3Q9H6Z4 567 aaPredicted RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 RNPEPL1Q9HAU8 725 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 AURKAIP1Q9NWT8 199 aaPredicted RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 PRPF19Q9UMS4 504 aaKnown RBP15.18■□□□□ 0.02
TPM1-226ENST00000560959 MAB21L2Q9Y586 359 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 SNX13Q9Y5W8 968 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 NOTCH3Q9UM47 2321 aa15.18■□□□□ 0.02
TPM1-226ENST00000560959 IGLV1-36A0A0B4J1U3 117 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 J3KTA2 159 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 FXYD1O00168 92 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 DCTN6O00399 190 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 RPS6KA3P51812 740 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 MICBQ29980 383 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 CFAP77Q6ZQR2 320 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 SLC36A1Q7Z2H8 476 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 Q8N7P7 452 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 SLC26A10Q8NG04 563 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 OR4S1Q8NGB4 309 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 C8orf46Q8TAG6 207 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms