RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 UBE2FQ969M7 185 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 ELMOD3Q96FG2 381 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 HRASLS5Q96KN8 279 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 ZNF582Q96NG8 517 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 EGLN1Q9GZT9 426 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 ADGRL4Q9HBW9 690 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 DCAF16Q9NXF7 216 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 HAO2Q9NYQ3 351 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC22A31A6NKX4 558 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 CD300LBA8K4G0 201 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 ANKRD65E5RJM6 399 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 H0YL77 283 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 H2BFMP0C1H6 154 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 SELEP16581 610 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 RBMXP38159 391 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 RAD23AP54725 363 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 ZNF121P58317 390 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 ZIK1Q3SY52 487 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 BHLHE23Q8NDY6 225 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 OR8J1Q8NGP2 316 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 ITLN1Q8WWA0 313 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 EME1Q96AY2 570 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 SGK3Q96BR1 496 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 C1orf159Q96HA4 380 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 MBOAT4Q96T53 435 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 C9orf16Q9BUW7 83 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 IL19Q9UHD0 177 aa12.92□□□□□ -0.34
SNRPA1-213ENST00000560856 TPD52L2O43399 206 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 PPIHO43447 177 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 APOC1P02654 83 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 HSD11B1P28845 292 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 CHN2P52757 468 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 RIPPLY3P57055 190 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 ROM1Q03395 351 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 ZSCAN26Q16670 478 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 ZBTB49Q6ZSB9 765 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 MRPL21Q7Z2W9 205 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 GID4Q8IVV7 300 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 RFLNBQ8N5W9 214 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 OR10AD1Q8NGE0 317 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 CLDND2Q8NHS1 167 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 HPS1Q92902 700 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 MSI2Q96DH6 328 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 OR2V2Q96R30 315 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 CNN2Q99439 309 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 DNAJC27Q9NZQ0 273 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 H2AFY2Q9P0M6 372 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 LAMP5Q9UJQ1 280 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 LRP12Q9Y561 859 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 N6AMT1Q9Y5N5 214 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 DYSFO75923 2080 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 JMJD1CQ15652 2540 aa12.91□□□□□ -0.34
SNRPA1-213ENST00000560856 TANC2Q9HCD6 1990 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 INAFM1C9JVW0 142 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 DLGAP1O14490 977 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 XRCC2O43543 280 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 BAG2O95816 211 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 HLA-DPB1P04440 258 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 ANXA2P07355 339 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 SBK2P0C263 348 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 TNFSF4P23510 183 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 HTR1FP30939 366 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 GZMKP49863 264 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 LMO4P61968 165 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 FAM3AP98173 230 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 GABPB1Q06547 395 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 HFEQ30201 348 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 C6orf52Q5T4I8 152 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 CYB5R2Q6BCY4 276 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 DEGS2Q6QHC5 323 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 TRUB1Q8WWH5 349 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 CCL17Q92583 94 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 MEGF10Q96KG7 1140 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 OR8B4Q96RC9 309 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 NIPAL2Q9H841 368 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 TMEM100Q9NV29 134 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 WARS2Q9UGM6 360 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 WIPI2Q9Y4P8 454 aa12.9□□□□□ -0.34
SNRPA1-213ENST00000560856 hCG_38984A0A1B0GV85 526 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 F5H5P2 479 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 PSMD9O00233 223 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 GABRB1P18505 474 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 TNFRSF1AP19438 455 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 PMELP40967 661 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 CDC42P60953 191 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 SNRPGP62308 76 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 MAB21L1Q13394 359 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 AVPI1Q5T686 147 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 KCTD18Q6PI47 426 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF679Q8IYX0 411 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 OR56B2PQ8NGI1 322 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 OR52H1Q8NGJ2 320 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 FAM81AQ8TBF8 368 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms