RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 HIST2H3PS2Q5TEC6 136 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 TRIQKQ629K1 86 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 ZNF57Q68EA5 555 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 CCBE1Q6UXH8 406 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 HIST2H3AQ71DI3 136 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 CNEP1R1Q8N9A8 125 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 GDPD1Q8N9F7 314 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 OR4D6Q8NGJ1 314 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 OR1F12Q8NHA8 337 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 OR2H1Q9GZK4 316 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 C11orf54Q9H0W9 315 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 MMP28Q9H239 520 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 AUNIPQ9H7T9 357 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 MRPL15Q9P015 296 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 KDM4BO94953 1096 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 APOA1P02647 267 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 LCATP04180 440 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 FAHP16930 419 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 ZNF20P17024 532 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 RFX2P48378 723 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 UBE2NLQ5JXB2 153 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 RHOUQ7L0Q8 258 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 RFT1Q96AA3 541 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 RNF122Q9H9V4 155 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 TIMM10BQ9Y5J6 103 aa9.5□□□□□ -0.89
SNRPA1-211ENST00000560433 INTS1Q8N201 2190 aaKnown RBP9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 ISPDA4D126 451 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 ZNF724A8MTY0 619 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FARS2O95363 451 aaKnown RBP9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 CDK2P24941 298 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 SCN1BQ07699 218 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 CD300CQ08708 224 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FOXF2Q12947 444 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 RAB35Q15286 201 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 KRT74Q7RTS7 529 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 RPRMLQ8N4K4 120 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 C9orf106Q8NAJ2 232 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 C19orf18Q8NEA5 215 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 OR5D18Q8NGL1 313 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FAM46BQ96A09 425 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FAM3DQ96BQ1 224 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 MS4A3Q96HJ5 214 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 THAP7Q9BT49 309 aaPredicted RBP9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 PRDM14Q9GZV8 571 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 OR51B6Q9H340 312 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 CNTD2Q9H8S5 307 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 PLEKHA1Q9HB21 404 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FAIMQ9NVQ4 179 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 LHX6Q9UPM6 363 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FOXJ3Q9UPW0 622 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 TP53TG5Q9Y2B4 290 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
SNRPA1-211ENST00000560433 FUOMA2VDF0 154 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 MMP7P09237 267 aaPredicted RBP9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 CRYGSP22914 178 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 HTR2CP28335 458 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 DEFA1P59665 94 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 DEFA3P59666 94 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 RAB11BQ15907 218 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 GLT8D1Q68CQ7 371 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 VWA1Q6PCB0 445 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 Q6ZS92 163 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 SIAH3Q8IW03 269 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 ITFG2Q969R8 447 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 SPTSSAQ969W0 71 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 SGK3Q96BR1 496 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 ZMAT3Q9HA38 289 aaKnown RBP9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 SLC17A5Q9NRA2 495 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 LOC100509620A0A075B734 347 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 TMEM272A0A1B0GTI8 110 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 CDK2AP1O14519 115 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 LYZL6O75951 148 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 IL18BPO95998 194 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 INPP1P49441 399 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 SCRN3Q0VDG4 424 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 IGFL3Q6UXB1 125 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 FGD2Q7Z6J4 655 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 NAXEQ8NCW5 288 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 OR1M1Q8NGA1 313 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 OR5D14Q8NGL3 314 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 OR14K1Q8NGZ2 314 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 SLC25A28Q96A46 364 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 MOB1AQ9H8S9 216 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 CLCF1Q9UBD9 225 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 PIGLQ9Y2B2 252 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 RAXQ9Y2V3 346 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 MSRB2Q9Y3D2 182 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 TLN1Q9Y490 2541 aaKnown RBP9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
SNRPA1-211ENST00000560433 IGKV1-9A0A0C4DH69 117 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 MEIOCA2RUB1 952 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 MEIS3P1A6NDR6 274 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 SLC17A2O00624 439 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 RAD51DO75771 328 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 ARSBP15848 533 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 FSTP19883 344 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 ACKR3P25106 362 aa9.47□□□□□ -0.89
SNRPA1-211ENST00000560433 CTSSP25774 331 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms