RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 PLPP2O43688 288 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 ZNF205O95201 554 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 HMGN1P05114 100 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 TNFRSF1AP19438 455 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 PAICSP22234 425 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 SLC2A5P22732 501 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 PMELP40967 661 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 NAA10P41227 235 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 MMP16P51512 607 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 BLVRAP53004 296 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 HCCSP53701 268 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 CRISP1P54107 249 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 SLC3A1Q07837 685 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 ZMYND11Q15326 602 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 ASRGL1Q7L266 308 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 MRPL21Q7Z2W9 205 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 MOGAT3Q86VF5 341 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 GLCCI1Q86VQ1 547 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 OR51F2Q8NH61 342 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 OR5K1Q8NHB7 308 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 RNF133Q8WVZ7 376 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 LRTOMTQ8WZ04 291 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 DUS3LQ96G46 650 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 REPIN1Q9BWE0 567 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 MMADHCQ9H3L0 296 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 TMEM100Q9NV29 134 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 TVP23BQ9NYZ1 205 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 KIF17Q9P2E2 1029 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 ZNF319Q9P2F9 582 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 AP4S1Q9Y587 144 aa9.81□□□□□ -0.84
RABGGTA-216ENST00000560243 G3V2T6 193 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 TMEM178BH3BS89 294 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 CYB5R3P00387 301 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 AVPP01185 164 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 IFNA2P01563 188 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 HNF1AP20823 631 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 CA6P23280 308 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 OPRL1P41146 370 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 CX3CR1P49238 355 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 HOXA4Q00056 320 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 MAB21L1Q13394 359 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 APOFQ13790 326 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 PTGES3Q15185 160 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 SNAPC1Q16533 368 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 FAM201AQ5SY85 155 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 C1orf229Q6ZS94 237 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 CXXC5Q7LFL8 322 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 PRSS45Q7RTY3 260 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 BCDIN3DQ7Z5W3 292 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 PEG10Q86TG7 708 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 PARP8Q8N3A8 854 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 DVL3Q92997 716 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 RAB39BQ96DA2 213 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 PLEKHA8Q96JA3 519 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 G6PC2Q9NQR9 355 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 DNAJC27Q9NZQ0 273 aa9.8□□□□□ -0.84
RABGGTA-216ENST00000560243 TRAV20A0A0B4J274 112 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 CCDC182A6NF36 153 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 PHF1O43189 567 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 PRODHO43272 600 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 TBX1O43435 398 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 PRKYO43930 277 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 ANXA2P07355 339 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 FASP25445 335 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 ZFP36P26651 326 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 SLC15A1P46059 708 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 SRP9P49458 86 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 ZNF121P58317 390 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 SEC61A1P61619 476 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 RPS7P62081 194 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 BTG1P62324 171 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 GRB2P62993 217 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 LCN2P80188 198 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 MPPED2Q15777 294 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 FAHD2BQ6P2I3 314 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 FAM57BQ71RH2 274 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 SHFQ7M4L6 423 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 LRRC28Q86X40 367 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 OR56B2PQ8NGI1 322 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 OTOSQ8NHW6 89 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 THEM6Q8WUY1 208 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 DNAJC9Q8WXX5 260 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 SGK3Q96BR1 496 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 FAHD2AQ96GK7 314 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 SEMA6AQ9H2E6 1030 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 PPP1R3EQ9H7J1 279 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 BRD7Q9NPI1 651 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 KRT84Q9NSB2 600 aa9.79□□□□□ -0.84
RABGGTA-216ENST00000560243 PRR32B1ATL7 298 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 CIB2O75838 187 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 MRPL3P09001 348 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 H2BFMP0C1H6 154 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 HSD11B1P28845 292 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 POLR2IP36954 125 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 SRP14P37108 136 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 RAD23AP54725 363 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 OR8G1Q15617 311 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms