RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 DRAM2Q6UX65 266 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 FBXW12Q6X9E4 464 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 SPATC1Q76KD6 591 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 SHFQ7M4L6 423 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 BCDIN3DQ7Z5W3 292 aaKnown RBP7.98□□□□□ -1.13
LDLR-211ENST00000560173 GPR141Q7Z602 305 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 BIVMQ86UB2 503 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 ZNF454Q8N9F8 522 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 OR5L1Q8NGL2 311 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 OTOSQ8NHW6 89 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 UBASH3BQ8TF42 649 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 RNF133Q8WVZ7 376 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 HAVCR1Q96D42 359 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 CMBLQ96DG6 245 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 ZNF799Q96GE5 643 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 MDFIQ99750 246 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 ABHD6Q9BV23 337 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 CYSLTR2Q9NS75 346 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 PLCXD1Q9NUJ7 323 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 CLN6Q9NWW5 311 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 NKIRAS2Q9NYR9 191 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 PTTG3PQ9NZH4 202 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 CGGBP1Q9UFW8 167 aaPredicted RBP7.98□□□□□ -1.13
LDLR-211ENST00000560173 PURGQ9UJV8 347 aaKnown RBP7.98□□□□□ -1.13
LDLR-211ENST00000560173 KLHDC2Q9Y2U9 406 aa7.98□□□□□ -1.13
LDLR-211ENST00000560173 FN1P02751 2386 aaKnown RBP7.98□□□□□ -1.13
LDLR-211ENST00000560173 CHD3Q12873 2000 aaKnown RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 PLSCR5A0PG75 271 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 VWC2LB2RUY7 222 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 NDUFS8O00217 210 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 SLC1A7O00341 560 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 NOL3O60936 208 aaKnown RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 IGHV1-46P01743 117 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 LCATP04180 440 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 ADH4P08319 380 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 JUNBP17275 347 aaPredicted RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 GIFP27352 417 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 LIPAP38571 399 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 OPRL1P41146 370 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 MAGEB1P43366 347 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 ALDH3B2P48448 385 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 ZNF81P51508 661 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 PRKXP51817 358 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 GRB2P62993 217 aaKnown RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 MRPS11P82912 194 aaKnown RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 GGTLC2Q14390 218 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 HLXQ14774 488 aaPredicted RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 TAF13Q15543 124 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 SNAI3Q3KNW1 292 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 ZMAT1Q5H9K5 638 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 MEDAGQ5VYS4 303 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 NXNL2Q5VZ03 156 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 RHOUQ7L0Q8 258 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 MEPCEQ7L2J0 689 aaKnown RBP7.97□□□□□ -1.13
LDLR-211ENST00000560173 SLC16A9Q7RTY1 509 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 NAA40Q86UY6 237 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 GID4Q8IVV7 300 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 MAPK1IP1LQ8NDC0 245 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 RHOXF1Q8NHV9 184 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 FAM81AQ8TBF8 368 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 FCGR1BQ92637 280 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 MYDGFQ969H8 173 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 IL4I1Q96RQ9 567 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 TEAD3Q99594 435 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 KCNJ15Q99712 375 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 SMR3AQ99954 134 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 PIMREGQ9BSJ6 248 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 YIPF3Q9GZM5 350 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 MSL2Q9HCI7 577 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 CENPMQ9NSP4 180 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 PCDHGB1Q9Y5G3 927 aa7.97□□□□□ -1.13
LDLR-211ENST00000560173 CR1P17927 2039 aa7.96□□□□□ -1.13
LDLR-211ENST00000560173 IRGMA1A4Y4 181 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 C5orf63A6NC05 138 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 EFCAB10A6NFE3 127 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 SLC22A31A6NKX4 558 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 LYNX1G3V0Z9 82 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 SPRY3O43610 288 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 FAM20BO75063 409 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 RP2O75695 350 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 CD55P08174 381 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 MRPL3P09001 348 aaKnown RBP7.96□□□□□ -1.14
LDLR-211ENST00000560173 LYNX1P0DP58 116 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 SLC2A1P11166 492 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 ALOX5APP20292 161 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 NR4A2P43354 598 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 SLC15A1P46059 708 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 SLC6A9P48067 706 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 CX3CR1P49238 355 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 SNRPGP62308 76 aaKnown RBP7.96□□□□□ -1.14
LDLR-211ENST00000560173 CCL8P80075 99 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 KRTAP1-1Q07627 177 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 LOXL1Q08397 574 aaPredicted RBP7.96□□□□□ -1.14
LDLR-211ENST00000560173 MALLQ13021 153 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 RIN1Q13671 783 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 GK2Q14410 553 aaPredicted RBP7.96□□□□□ -1.14
LDLR-211ENST00000560173 FAM209AQ5JX71 171 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 OR2T2Q6IF00 324 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 Q6ZR03 302 aa7.96□□□□□ -1.14
LDLR-211ENST00000560173 PRSS45Q7RTY3 260 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms